RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MOGAT3Q86VF5 341 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 SLC35F3Q8IY50 421 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 TRAPPC12Q8WVT3 735 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 STAMQ92783 540 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 BBS4Q96RK4 519 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 PLCB1Q9NQ66 1216 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 A0A0G2JLW4 131 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 VWA3AA6NCI4 1184 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 B9A039 149 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 KLK10O43240 276 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ERVK-10P10266 1014 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 GNB3P16520 340 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF26P17031 533 aaPredicted RBP4.4□□□□□ -1.71
LINC01040-201ENST00000425048 CSRP3P50461 194 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
LINC01040-201ENST00000425048 PRKG1Q13976 671 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 HIST2H2ACQ16777 129 aaPredicted RBP4.4□□□□□ -1.71
LINC01040-201ENST00000425048 MAP9Q49MG5 647 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 GGNBP1Q5YKI7 109 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 FBXO46Q6PJ61 603 aaPredicted RBP4.4□□□□□ -1.71
LINC01040-201ENST00000425048 SUSD1Q6UWL2 747 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ADGRG6Q86SQ4 1221 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 FTSJ3Q8IY81 847 aaKnown RBP4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ZBTB2Q8N680 514 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ART5Q96L15 291 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 QRFPRQ96P65 431 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 TRIM15Q9C019 465 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF700Q9H0M5 742 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 WDR13Q9H1Z4 485 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 PLEKHA4Q9H4M7 779 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 PDZD7Q9H5P4 517 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 PPP1R3EQ9H7J1 279 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 SLC52A3Q9NQ40 469 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 ZDHHC18Q9NUE0 388 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 PAK5Q9P286 719 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 POLG2Q9UHN1 485 aa4.4□□□□□ -1.71
LINC01040-201ENST00000425048 PLIN1O60240 522 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 HEXAP06865 529 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 CNPP09543 421 aaKnown RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 POU1F1P28069 291 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 SHMT1P34896 483 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 AMPHP49418 695 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 CLK1P49759 484 aaKnown RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 POSTNQ15063 836 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 ANKRD45Q5TZF3 282 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 OR7E24Q6IFN5 339 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 FAM53AQ6NSI3 398 aaPredicted RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 DUS1LQ6P1R4 473 aaKnown RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 TRPT1Q86TN4 253 aaKnown RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 C11orf65Q8NCR3 313 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 SPPL3Q8TCT6 385 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 NOC3LQ8WTT2 800 aaKnown RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 LINGO1Q96FE5 620 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 PCYT2Q99447 389 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 EYA3Q99504 573 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 BEX4Q9NWD9 120 aaPredicted RBP4.39□□□□□ -1.71
LINC01040-201ENST00000425048 FEM1BQ9UK73 627 aa4.39□□□□□ -1.71
LINC01040-201ENST00000425048 ARHGEF9O43307 516 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 CIDEAO60543 219 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF821O75541 412 aaPredicted RBP4.38□□□□□ -1.71
LINC01040-201ENST00000425048 HOXC8P31273 242 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 ITGA9Q13797 1035 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 TRIM14Q14142 442 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 TCTE1Q5JU00 501 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 FAAP20Q6NZ36 180 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 TNIP2Q8NFZ5 429 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF653Q96CK0 615 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF689Q96CS4 500 aaPredicted RBP4.38□□□□□ -1.71
LINC01040-201ENST00000425048 OPRPNQ99935 248 aaPredicted RBP4.38□□□□□ -1.71
LINC01040-201ENST00000425048 ERVMER34-1Q9H9K5 563 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 PTPRCP08575 1304 aa4.38□□□□□ -1.71
LINC01040-201ENST00000425048 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 SH2B2O14492 632 aaPredicted RBP4.37□□□□□ -1.71
LINC01040-201ENST00000425048 TSPAN3O60637 253 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 FAM106CPP0CH98 169 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 POLR2CP19387 275 aaPredicted RBP4.37□□□□□ -1.71
LINC01040-201ENST00000425048 ZNF667Q5HYK9 610 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 SPINK14Q6IE38 97 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 CCDC174Q6PII3 467 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 BRAT1Q6PJG6 821 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 DHX40Q8IX18 779 aaKnown RBP4.37□□□□□ -1.71
LINC01040-201ENST00000425048 OR52I2Q8NH67 350 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 RUFY2Q8WXA3 655 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 CDK19Q9BWU1 502 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 ACSL5Q9ULC5 683 aa4.37□□□□□ -1.71
LINC01040-201ENST00000425048 TEX22C9J3V5 150 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 CTSVO60911 334 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 CD48P09326 243 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 PPP2R5BQ15173 497 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 ZFP69Q49AA0 526 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 TECRLQ5HYJ1 363 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 SLC46A3Q7Z3Q1 461 aa4.36□□□□□ -1.71
LINC01040-201ENST00000425048 PCDH20Q8N6Y1 951 aaKnown RBP4.36□□□□□ -1.71
LINC01040-201ENST00000425048 LSM14AQ8ND56 463 aaKnown RBP4.36□□□□□ -1.71
LINC01040-201ENST00000425048 FCAMRQ8WWV6 532 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms