RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 SIT1Q9Y3P8 196 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 FAM170BA6NMN3 283 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 PRAMEF1O95521 474 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 SDHBP21912 280 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 HNRNPKP61978 463 aaKnown RBP eCLIP8.38□□□□□ -1.077e-6■■■■□ 19.6
CHD7-201ENST00000423902 PFKFB4Q16877 469 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 GRAMD1BQ3KR37 738 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 CIR1Q86X95 450 aaPredicted RBP8.38□□□□□ -1.07
CHD7-201ENST00000423902 MPP5Q8N3R9 675 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 C12orf76Q8N812 135 aaPredicted RBP8.38□□□□□ -1.07
CHD7-201ENST00000423902 C7orf57Q8NEG2 295 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 MIPOL1Q8TD10 442 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 CERS2Q96G23 380 aa8.38□□□□□ -1.07
CHD7-201ENST00000423902 KRT75O95678 551 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 TAF1AQ15573 450 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 MINDY4Q4G0A6 757 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 DNAL1Q4LDG9 190 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 LMLNQ96KR4 655 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 TUBGCP5Q96RT8 1024 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PRMT1Q99873 361 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 MRPL57Q9BQC6 102 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 SMG9Q9H0W8 520 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 USP12O75317 370 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PKMP14618 531 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 CSTF3Q12996 717 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 MSANTD2Q6P1R3 559 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 DPYSL5Q9BPU6 564 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 LMAN1LQ9HAT1 526 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 C19orf25Q9UFG5 118 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 SNX5Q9Y5X3 404 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 LRRC10BA6NIK2 292 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 SOCS5O75159 536 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 RANBP1P43487 201 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 CSTF1Q05048 431 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 FAAP100Q0VG06 881 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 UBXN11Q5T124 520 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 TMEM220Q6QAJ8 160 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 QKIQ96PU8 341 aaKnown RBP eCLIP8.37□□□□□ -1.077e-7■■■■■ 29.1
CHD7-201ENST00000423902 SPHK2Q9NRA0 654 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 VEGFDO43915 354 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 RFPL2O75678 378 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 SEC31AO94979 1220 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 HIPK4Q8NE63 616 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 B4GALNT2Q8NHY0 566 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 GPR174Q9BXC1 333 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 MTCL1Q9Y4B5 1905 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 CCZ1BP86790 482 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 CCZ1P86791 482 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 SMAD4Q13485 552 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 MYLK3Q32MK0 819 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 CHST15Q7LFX5 561 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 SIX5Q8N196 739 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PIP4K2CQ8TBX8 421 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 LINGO1Q96FE5 620 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 H0YGN5 161 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 KAT7O95251 611 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PON2Q15165 354 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 CES3Q6UWW8 571 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 SNX20Q7Z614 316 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PEX5LQ8IYB4 626 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 OSBPL6Q9BZF3 934 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 SPATS2LQ9NUQ6 558 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 OR5K4A6NMS3 321 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 TBX18O95935 607 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 ADSSP30520 456 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 BMPR2Q13873 1038 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 HNRNPDQ14103 355 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 MS4A13Q5J8X5 152 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 C16orf62Q7Z3J2 963 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 RALGPS2Q86X27 583 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 UBALD2Q8IYN6 164 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 ARMC5Q96C12 935 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 GBP5Q96PP8 586 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 LGMNQ99538 433 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 BRCA1P38398 1863 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 EPN2O95208 641 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PIRTP0C851 137 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 RABIFP47224 123 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 DEFB119Q8N690 84 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 GPR156Q8NFN8 814 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 OR2AP1Q8NGE2 309 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 C12orf66Q96MD2 445 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PRRX2Q99811 253 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 MBLAC1A4D2B0 266 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 TMEM150CB9EJG8 249 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 PIRO00625 290 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 WDR47O94967 919 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 OTCP00480 354 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 C8GP07360 202 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 ABCB1P08183 1280 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 RPS24P62847 133 aaKnown RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 ABHD13Q7L211 337 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 DLG3Q92796 817 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 NTAN1Q96AB6 310 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 P2RY11Q96G91 374 aa8.37□□□□□ -1.07
CHD7-201ENST00000423902 CCDC177Q9NQR7 707 aaPredicted RBP8.37□□□□□ -1.07
CHD7-201ENST00000423902 PSME4Q14997 1843 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms