RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZDHHC24Q6UX98 284 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 SYT12Q8IV01 421 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 AGGF1Q8N302 714 aaeCLIP16.94■□□□□ 0.3
COL7A1-202ENST00000422991 MPP5Q8N3R9 675 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 GPR26Q8NDV2 337 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 OR4K2Q8NGD2 314 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 OR13C4Q8NGS5 318 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 PTCD2Q8WV60 388 aaKnown RBP16.94■□□□□ 0.3
COL7A1-202ENST00000422991 RUBCNQ92622 972 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 ART4Q93070 314 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 SCAMP4Q969E2 229 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 PLEKHG4BQ96PX9 1271 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 CDH19Q9H159 772 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 TM9SF3Q9HD45 589 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 RIMKLBQ9ULI2 386 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 CA5BQ9Y2D0 317 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 CACNA1EQ15878 2313 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 K7ESM1 405 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 SLU7O95391 586 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PCCBP05166 539 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 RHOXF2BP0C7M4 288 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 SPAM1P38567 509 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 ARL4CP56559 192 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 CLDN2P57739 230 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 CAV1Q03135 178 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 HIF1AQ16665 826 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 MSS51Q4VC12 460 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 DNAJC21Q5F1R6 531 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 TEX35Q5T0J7 233 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 ZDHHC20Q5W0Z9 365 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 ALS2CLQ60I27 953 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 KYAT3Q6YP21 454 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 NLRP9Q7RTR0 991 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 ABI3BPQ7Z7G0 1075 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 NLRP8Q86W28 1048 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PELI3Q8N2H9 469 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PLA2G15Q8NCC3 412 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 STYXQ8WUJ0 223 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PIGKQ92643 395 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 AP2M1Q96CW1 435 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 DNAJC1Q96KC8 554 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 SIGLEC10Q96LC7 697 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PWWP2AQ96N64 755 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 RHOXF2Q9BQY4 288 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 RIOK2Q9BVS4 552 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 KIFC1Q9BW19 673 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 FAM83DQ9H4H8 585 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 MRM3Q9HC36 420 aaKnown RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 EPB41L5Q9HCM4 733 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 AASDHPPTQ9NRN7 309 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 FAM114A2Q9NRY5 505 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 TMEM74BQ9NUR3 256 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 NLE1Q9NVX2 485 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 SUSD2Q9UGT4 822 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 SOX13Q9UN79 622 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PCDHGA5Q9Y5G8 931 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 HS3ST3A1Q9Y663 406 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 EP300Q09472 2414 aaPredicted RBP16.93■□□□□ 0.3
COL7A1-202ENST00000422991 OTOGLQ3ZCN5 2332 aa16.93■□□□□ 0.3
COL7A1-202ENST00000422991 PLXNB3Q9ULL4 1909 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 A0A1W2PR77 199 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 CCDC78A2IDD5 438 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 POM121BA6NF01 834 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 SDR42E2A6NKP2 422 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 H0Y8X5 98 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 GAPDHSO14556 408 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-202ENST00000422991 FPGTO14772 594 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 BCAT2O15382 392 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-202ENST00000422991 SOD1P00441 154 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 TSHRP16473 764 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 PLTPP55058 493 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 ACVR1Q04771 509 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 TSTD2Q5T7W7 516 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 KDM7AQ6ZMT4 941 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 PDIK1LQ8N165 341 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 FBXO25Q8TCJ0 367 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 PEX13Q92968 403 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 BMFQ96LC9 184 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 ZNF778Q96MU6 729 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 IL26Q9NPH9 171 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 ZDHHC18Q9NUE0 388 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 FKBPLQ9UIM3 349 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 LAMA1P25391 3075 aa16.92■□□□□ 0.3
COL7A1-202ENST00000422991 PI4KAP42356 2102 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 A0A1B0GTW7 788 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 A6NNZ2 444 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 CCL22O00626 93 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 BANF1O75531 89 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 GNSP15586 552 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 TEAD1P28347 426 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 CD38P28907 300 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 HADHAP40939 763 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 AFF3P51826 1226 aaKnown RBP16.91■□□□□ 0.3
COL7A1-202ENST00000422991 DHX9Q08211 1270 aaKnown RBP16.91■□□□□ 0.3
COL7A1-202ENST00000422991 CBLBQ13191 982 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 INPP5AQ14642 412 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 STAT4Q14765 748 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 SKIDA1Q1XH10 827 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 BBS9Q3SYG4 887 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms