RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 FEM1AQ9BSK4 669 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ZDHHC6Q9H6R6 413 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PCDH18Q9HCL0 1135 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 MARCH2Q9P0N8 246 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PCDHGA4Q9Y5G9 962 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 NPEPPSL1A6NEC2 478 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 WNT7AO00755 349 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 AP3D1O14617 1153 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 SLC28A2O43868 658 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 FABP3P05413 133 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CASP7P55210 303 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 FAM171A1Q5VUB5 890 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 WSCD1Q658N2 575 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CXorf57Q6NSI4 855 aaKnown RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 TMPRSS11AQ6ZMR5 421 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 SPEF1Q9Y4P9 236 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 SLIT1O75093 1534 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 NFASCO94856 1347 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CYP3A7-CYP3A51PA0A087WV96 503 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 RECQL4O94761 1208 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CYP3A7P24462 503 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PIGZQ86VD9 579 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PIK3R3Q92569 461 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 SENP8Q96LD8 212 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 SSU72Q9NP77 194 aaKnown RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CNTNAP4Q9C0A0 1308 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 TEX28O15482 410 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 TBX1O43435 398 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PRLP01236 227 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ERBB2P04626 1255 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 GPIP06744 558 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 TAS2R41P59536 307 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 POLR2LP62875 67 aaKnown RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PHC1P78364 1004 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ZYG11AQ6WRX3 759 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 CNPPD1Q9BV87 410 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 C1QTNF1Q9BXJ1 281 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 AAASQ9NRG9 546 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 TAS2R1Q9NYW7 299 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PSME2Q9UL46 239 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 GRIN2DO15399 1336 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ELOVL7A1L3X0 281 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 NOL4O94818 638 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 NCK1P16333 377 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 RPS12P25398 132 aaKnown RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 IST1P53990 364 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PPP2R2BQ00005 443 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 MYBPC1Q00872 1141 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 RAPSNQ13702 412 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 UBR7Q8N806 425 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 LRRC57Q8N9N7 239 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 FAIM2Q9BWQ8 316 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 TBC1D24Q9ULP9 559 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 C9JVG2 144 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 WWP2O00308 870 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PPIBP23284 216 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 BMT2Q1RMZ1 405 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 RUNDC3AQ59EK9 446 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 POTEHQ6S545 545 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TMEM86AQ8N2M4 240 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 C12orf29Q8N999 325 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 KREMEN1Q96MU8 473 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 INTS7Q9NVH2 962 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 HNF4AP41235 474 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PTGIRP43119 386 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ANKRD22Q5VYY1 191 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ERI1Q8IV48 349 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 VANGL1Q8TAA9 524 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 FCRL4Q96PJ5 515 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TMPRSS4Q9NRS4 437 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 SPG21Q9NZD8 308 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TIMM22Q9Y584 194 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PRAMEF10O60809 474 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 IFI30P13284 250 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 IL1R1P14778 569 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 FOSL2P15408 326 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TPSB2P20231 275 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 MAPK9P45984 424 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TPSAB1Q15661 275 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ZACNQ401N2 412 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 NADK2Q4G0N4 442 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 RNASEH2BQ5TBB1 312 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PLEKHH3Q7Z736 793 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF410Q86VK4 478 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 RAD51AP1Q96B01 352 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ZYG11BQ9C0D3 744 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 MAT2BQ9NZL9 334 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ST3GAL5Q9UNP4 418 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 UGT2B17O75795 530 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PGLSO95336 258 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 AXLP30530 894 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PFKPQ01813 784 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 PDCD4Q53EL6 469 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 HECTD2Q5U5R9 776 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms