RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 LUZP1Q86V48 1076 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 PIM3Q86V86 326 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 RAVER1Q8IY67 606 aaKnown RBP17.31■□□□□ 0.36
MSH6-203ENST00000420813 TSGA13Q96PP4 275 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 ZNF670Q9BS34 389 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 B3GNT4Q9C0J1 378 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 CDH19Q9H159 772 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 GOLGA6AQ9NYA3 693 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 DNPEPQ9ULA0 475 aa17.31■□□□□ 0.36
MSH6-203ENST00000420813 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
MSH6-203ENST00000420813 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 RHPN2P1A8MT19 583 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 MATN3O15232 486 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 B4GAT1O43505 415 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 CCNCP24863 283 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 AK4P27144 223 aaPredicted RBP17.3■□□□□ 0.36
MSH6-203ENST00000420813 ADCY8P40145 1251 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 SSR1P43307 286 aaKnown RBP17.3■□□□□ 0.36
MSH6-203ENST00000420813 CTBSQ01459 385 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 ITKQ08881 620 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 PDK2Q15119 407 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 IFI16Q16666 785 aaKnown RBP17.3■□□□□ 0.36
MSH6-203ENST00000420813 PHF19Q5T6S3 580 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 TMPRSS9Q7Z410 1059 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 ZNF564Q8TBZ8 553 aaPredicted RBP17.3■□□□□ 0.36
MSH6-203ENST00000420813 AP2M1Q96CW1 435 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 ABCG8Q9H221 673 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 SUDS3Q9H7L9 328 aaPredicted RBP17.3■□□□□ 0.36
MSH6-203ENST00000420813 AKAP7Q9P0M2 348 aaPredicted RBP17.3■□□□□ 0.36
MSH6-203ENST00000420813 LCMT1Q9UIC8 334 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 NENFQ9UMX5 172 aa17.3■□□□□ 0.36
MSH6-203ENST00000420813 SYCE3A1L190 88 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 ECEL1O95672 775 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 GYPCP04921 128 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 ITIH1P19827 911 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 CA4P22748 312 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 CD82P27701 267 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 EPHB1P54762 984 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 PTPRRQ15256 657 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 KIAA1614Q5VZ46 1190 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 SLC30A9Q6PML9 568 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 MAP7D3Q8IWC1 876 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 NRSN1Q8IZ57 195 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 NAGSQ8N159 534 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 PTCD2Q8WV60 388 aaKnown RBP17.29■□□□□ 0.36
MSH6-203ENST00000420813 CPLX3Q8WVH0 158 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 OR2M4Q96R27 311 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 TDRD1Q9BXT4 1180 aaKnown RBP17.29■□□□□ 0.36
MSH6-203ENST00000420813 SEMA6CQ9H3T2 930 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 SEPT10Q9P0V9 454 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 UVRAGQ9P2Y5 699 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 ST14Q9Y5Y6 855 aa17.29■□□□□ 0.36
MSH6-203ENST00000420813 PRAMEF33A0A0G2JMD5 474 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 GOLGA6L19H0YKK7 550 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 HGSO14964 777 aaPredicted RBP17.28■□□□□ 0.36
MSH6-203ENST00000420813 EFSO43281 561 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 PRAMEF10O60809 474 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 PROSCO94903 275 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 MX2P20592 715 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 ALDH4A1P30038 563 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 ETV5P41161 510 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 POLD2P49005 469 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 STC1P52823 247 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 OR1D5P58170 312 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 RPL26P61254 145 aaKnown RBP17.28■□□□□ 0.36
MSH6-203ENST00000420813 DSC2Q02487 901 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 PTSQ03393 145 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 BIRC2Q13490 618 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 LY6DQ14210 128 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 C16orf72Q14CZ0 275 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 ANKRD20A8PQ5CZ79 823 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 RFLNAQ6ZTI6 216 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 KCTD6Q8NC69 237 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 FAF2Q96CS3 445 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 MED8Q96G25 268 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 LYSMD1Q96S90 227 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 SEMA4CQ9C0C4 833 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 RDH14Q9HBH5 336 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 RBM22Q9NW64 420 aaKnown RBP eCLIP17.28■□□□□ 0.36
MSH6-203ENST00000420813 CD84Q9UIB8 345 aa17.28■□□□□ 0.36
MSH6-203ENST00000420813 RPL26L1Q9UNX3 145 aaKnown RBP17.28■□□□□ 0.36
MSH6-203ENST00000420813 A0A0U1RQS6 177 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 C9orf172C9J069 976 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.27■□□□□ 0.36
MSH6-203ENST00000420813 KRT7P08729 469 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 CD1CP29017 333 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 HNRNPH3P31942 346 aaKnown RBP17.27■□□□□ 0.36
MSH6-203ENST00000420813 ACTR1BP42025 376 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 MAPK10P53779 464 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 ACTR1AP61163 376 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 SQSTM1Q13501 440 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 TRA2AQ13595 282 aaKnown RBP eCLIP17.27■□□□□ 0.36
MSH6-203ENST00000420813 LRP8Q14114 963 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 IHHQ14623 411 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 TGIF1Q15583 401 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 AMZ1Q400G9 498 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 ATP13A4Q4VNC1 1196 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 PYCR3Q53H96 274 aa17.27■□□□□ 0.36
MSH6-203ENST00000420813 TMEM164Q5U3C3 297 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms