RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 BBS12Q6ZW61 710 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 ZNF765Q7L2R6 523 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 KDELC2Q7Z4H8 507 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 TAF8Q7Z7C8 310 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 NRSN1Q8IZ57 195 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 CBARPQ8N350 705 aaPredicted RBP12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 SPATA22Q8NHS9 363 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 SCAMP4Q969E2 229 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 TEKT5Q96M29 485 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 QKIQ96PU8 341 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 DEPDC7Q96QD5 511 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 DESI2Q9BSY9 194 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 TMEM168Q9H0V1 697 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 ABCG8Q9H221 673 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 GLOD4Q9HC38 313 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 GPR34Q9UPC5 381 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 DSPP15924 2871 aaKnown RBP12.69□□□□□ -0.38
HMGN1P4-201ENST00000419500 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 ARID1BQ8NFD5 2236 aaPredicted RBP12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 GRID2IPA4D2P6 1211 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 HACD1B0YJ81 288 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 B4DGG1 531 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 H7C0C1 242 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 PMPCBO75439 489 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 MT-CO3P00414 261 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 NFKB1P19838 968 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 GNPDA1P46926 289 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 ATP5OP48047 213 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 GSDMDP57764 484 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 CDK18Q07002 472 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 ILF3Q12906 894 aaKnown RBP eCLIP12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 CAMK2BQ13554 666 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 NOMO1Q15155 1222 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 SLC14A2Q15849 920 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 FAM182AQ5T1J6 154 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 ADAMTSL4Q6UY14 1074 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 RFLNAQ6ZTI6 216 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 PEX26Q7Z412 305 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 KYQ8NBH2 561 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 HTR3CQ8WXA8 447 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 TRIB3Q96RU7 358 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 VAT1Q99536 393 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 FRMD8Q9BZ67 464 aaPredicted RBP12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 SYNDIG1Q9H7V2 258 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 UBP1Q9NZI7 540 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 PADI4Q9UM07 663 aa12.68□□□□□ -0.38
HMGN1P4-201ENST00000419500 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 MIF4GDA9UHW6 222 aaKnown RBP12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 MT-CYBP00156 380 aaPredicted RBP12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 SOD1P00441 154 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 CEACAM5P06731 702 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 OTUD4Q01804 1114 aaKnown RBP12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 WASHC5Q12768 1159 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 XRCC4Q13426 336 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 LYSMD3Q7Z3D4 306 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 TRIM74Q86UV6 250 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 PROSER1Q86XN7 944 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 CACTIN-AS1Q8N1I8 211 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 LRRC57Q8N9N7 239 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 FAM46DQ8NEK8 389 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 OR6C4Q8NGE1 309 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 WDR48Q8TAF3 677 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 HIC2Q96JB3 615 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 CCDC3Q9BQI4 270 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 RIOK2Q9BVS4 552 aaKnown RBP12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 GSDMCQ9BYG8 508 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 OSBPL8Q9BZF1 889 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 CDH19Q9H159 772 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 DPEP2Q9H4A9 486 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 ZFYVE1Q9HBF4 777 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 TRIM10Q9UDY6 481 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 FAM153AQ9UHL3 310 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 RSPH14Q9UHP6 348 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 TRHDEQ9UKU6 1024 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 AMFRQ9UKV5 643 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 SUFUQ9UMX1 484 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 ANKRD11Q6UB99 2663 aaPredicted RBP12.67□□□□□ -0.38
HMGN1P4-201ENST00000419500 RGSL1A5PLK6 1076 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 SRRM3A6NNA2 597 aaPredicted RBP12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 F5H423 210 aaPredicted RBP12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 INPP4BO15327 924 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 TJP3O95049 919 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 ASMTLO95671 621 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 NDST3O95803 873 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 IVLP07476 585 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 PIRTP0C851 137 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 PTPN7P35236 360 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 POLD2P49005 469 aa12.66□□□□□ -0.38
HMGN1P4-201ENST00000419500 SPINT3P49223 89 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms