RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MRPS31Q92665 395 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 IQCDQ96DY2 449 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 CLIP3Q96DZ5 547 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 RRP36Q96EU6 259 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 HSPBAP1Q96EW2 488 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 CCDC42Q96M95 316 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 C5orf34Q96MH7 638 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SH2D3AQ9BRG2 576 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 UBAC1Q9BSL1 405 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 LRRC27Q9C0I9 530 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ABCG4Q9H172 646 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 NUP62CLQ9H1M0 184 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 LINC00597Q9H2U6 94 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM206Q9H813 350 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PTPRHQ9HD43 1115 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PRDM8Q9NQV8 689 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ANLNQ9NQW6 1124 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ITM2CQ9NQX7 267 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 DNAJC28Q9NX36 388 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 IL1RAPL1Q9NZN1 696 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 KLHL14Q9P2G3 628 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 LARSQ9P2J5 1176 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SEC63Q9UGP8 760 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TMPRSS11EQ9UL52 423 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 DDX19BQ9UMR2 479 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PLA2G2DQ9UNK4 145 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 FAM32AQ9Y421 112 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ASB1Q9Y576 335 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SNX9Q9Y5X1 595 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 APCP25054 2843 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 UBA6A0AVT1 1052 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 MTMR11A4FU01 709 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 KCNJ18B7U540 433 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKRD65E5RJM6 399 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 GOLGA8TH3BQL2 631 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 SNX2O60749 519 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CUTAO60888 179 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PFDN1O60925 122 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ANP32DO95626 131 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 IGLV3-19P01714 112 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 S100A6P06703 90 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 OR4Q2P0C623 313 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 UBL4AP11441 157 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 WT1P19544 449 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ATP6V1C1P21283 382 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC5A2P31639 672 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PTGER4P35408 488 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 MAPKAPK2P49137 400 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 TPMTP51580 245 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 B2MP61769 119 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PLOD1Q02809 727 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 KLC1Q07866 573 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 DMPKQ09013 629 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ADAM9Q13443 819 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PKP1Q13835 747 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ACAP2Q15057 778 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 MAPRE1Q15691 268 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 GSTA3Q16772 222 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 UGT8Q16880 541 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 EIF2S3LQ2VIR3 472 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 GFOD2Q3B7J2 385 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PITRM1Q5JRX3 1037 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 FKBP15Q5T1M5 1219 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CFAP58Q5T655 872 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 SPATA1Q5VX52 437 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 NAA35Q5VZE5 725 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 FCRLBQ6BAA4 426 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CENPPQ6IPU0 288 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC2A7Q6PXP3 512 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ESPNLQ6ZVH7 1005 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 TMEM150AQ86TG1 271 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CDR2LQ86X02 465 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 LYSMD2Q8IV50 215 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 RHOT2Q8IXI1 618 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 SPARTQ8N0X7 666 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 TEX19Q8NA77 164 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 HIPK4Q8NE63 616 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 WDR36Q8NI36 951 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 WDR60Q8WVS4 1066 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PRPF31Q8WWY3 499 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 EFHD2Q96C19 240 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 MED30Q96HR3 178 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 OLFM3Q96PB7 478 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PPP1R10Q96QC0 940 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 PRPF18Q99633 342 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 SEPT5Q99719 369 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 GABRG3Q99928 467 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 UQCC2Q9BRT2 126 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 HGH1Q9BTY7 390 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 QRSL1Q9H0R6 528 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CXCL16Q9H2A7 254 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 NDST4Q9H3R1 872 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ANKZF1Q9H8Y5 726 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ARNT2Q9HBZ2 717 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 DTLQ9NZJ0 730 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CRNNQ9UBG3 495 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms