RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CSF2P04141 144 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 ZSCAN5DPP0CG00 497 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 CD59P13987 128 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 FNTAP49354 379 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 BLKP51451 505 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 PDE1BQ01064 536 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 SEMA5AQ13591 1074 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 ENPP7Q6UWV6 458 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 KDM7AQ6ZMT4 941 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 BRSK1Q8TDC3 778 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 FUBP1Q96AE4 644 aaKnown RBP23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 EID2BQ96D98 161 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 CAPZA3Q96KX2 299 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 WDR92Q96MX6 357 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 TEX101Q9BY14 249 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 SLC32A1Q9H598 525 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 PKP3Q9Y446 797 aa23.01■■□□□ 1.27
SMARCB1-205ENST00000417137 K7ESM1 405 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 TM4SF5O14894 197 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 FLRT2O43155 660 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 USP12O75317 370 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 CRTAMO95727 393 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 MYCLP1P12525 358 aaPredicted RBP23■■□□□ 1.27
SMARCB1-205ENST00000417137 NME1P15531 152 aaKnown RBP23■■□□□ 1.27
SMARCB1-205ENST00000417137 EPHA8P29322 1005 aaPredicted RBP23■■□□□ 1.27
SMARCB1-205ENST00000417137 DCDC1P59894 354 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 IL9RQ01113 521 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 PPARDQ03181 441 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 SHBQ15464 509 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 TAF1AQ15573 450 aaPredicted RBP23■■□□□ 1.27
SMARCB1-205ENST00000417137 DENND5AQ6IQ26 1287 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 ADAMTSL4Q6UY14 1074 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 DBX2Q6ZNG2 339 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 PRUNE1Q86TP1 453 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 HEATR4Q86WZ0 1026 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 CREG2Q8IUH2 290 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 GLIS1Q8NBF1 620 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 SAP25Q8TEE9 199 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 SETD7Q8WTS6 366 aaKnown RBP23■■□□□ 1.27
SMARCB1-205ENST00000417137 SLC13A1Q9BZW2 595 aa23■■□□□ 1.27
SMARCB1-205ENST00000417137 DMXL1Q9Y485 3027 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 TNFRSF10CO14798 259 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 AURKAO14965 403 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 SUN1O94901 812 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 JUNDP17535 347 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 CSRP1P21291 193 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 CDK3Q00526 305 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 EIF2B5Q13144 721 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 OLIG2Q13516 323 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 ZNF542PQ5EBM4 170 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 TPRG1LQ5T0D9 272 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 HENMT1Q5T8I9 393 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 TTC27Q6P3X3 843 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 SYT10Q6XYQ8 523 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 PELI3Q8N2H9 469 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 TTC30BQ8N4P2 665 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 OR56A4Q8NGH8 313 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 HIC2Q96JB3 615 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 PLEKHG4BQ96PX9 1271 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 ZSCAN5AQ9BUG6 496 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 SPATA16Q9BXB7 569 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 NFKBIL1Q9UBC1 381 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 KLQ9UEF7 1012 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 ADAMTS9Q9P2N4 1935 aa22.99■■□□□ 1.27
SMARCB1-205ENST00000417137 MED19A0JLT2 244 aaPredicted RBP22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 NEMP2A6NFY4 417 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 STX7O15400 261 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 RASGRP1O95267 797 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 KRT14P02533 472 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 APRTP07741 180 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 BPIP17213 487 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 LPOP22079 712 aaPredicted RBP22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 GRK6P43250 576 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 SRP54P61011 504 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 BASP1P80723 227 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 CDH17Q12864 832 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 BNIP3Q12983 259 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 PDPK2PQ6A1A2 396 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 PPP1R21Q6ZMI0 780 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 NAXDQ8IW45 347 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 DNAAF3Q8N9W5 541 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 GPR26Q8NDV2 337 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 RUNDC3BQ96NL0 473 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 LGR4Q9BXB1 951 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 BPIFA1Q9NP55 256 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 EIF2B3Q9NR50 452 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 IL17CQ9P0M4 197 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 SPASTQ9UBP0 616 aa22.98■■□□□ 1.27
SMARCB1-205ENST00000417137 AP3B1O00203 1094 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 SH3BP5O60239 455 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 PIAS2O75928 621 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 TNFP01375 233 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 DGKAP23743 735 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 PIP4P1Q86T03 277 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 GATAD2AQ86YP4 633 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 HID1Q8IV36 788 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 PHACTR4Q8IZ21 702 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 TRAM1L1Q8N609 369 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 RHBDD1Q8TEB9 315 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms