RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PILRAQ9UKJ1 303 aa10□□□□□ -0.81
MDC1-202ENST00000416571 LRRK2Q5S007 2527 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 BSNQ9UPA5 3926 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 PSMD11O00231 422 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 FUCA1P04066 466 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 IVLP07476 585 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 ERCC2P18074 760 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 TCN2P20062 427 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 PSMA2P25787 234 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 HSPA9P38646 679 aaKnown RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 GPR1P46091 355 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 FASLGP48023 281 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 RIPPLY3P57055 190 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 LRP8Q14114 963 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 DEFB109BQ30KR1 87 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 LACTB2Q53H82 288 aaPredicted RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 PPP6R3Q5H9R7 873 aaPredicted RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 ERMARDQ5T6L9 678 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 ARHGAP36Q6ZRI8 547 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 USP45Q70EL2 814 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 ZNF761Q86XN6 746 aaPredicted RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 NDUFAF2Q8N183 169 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 LZTR1Q8N653 840 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 PTCD2Q8WV60 388 aaKnown RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 STARD8Q92502 1023 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 RTP4Q96DX8 246 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 ABHD17AQ96GS6 310 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 ZNF599Q96NL3 588 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 ZPBPQ9BS86 351 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 TRIT1Q9H3H1 467 aaKnown RBP9.99□□□□□ -0.81
MDC1-202ENST00000416571 LRRC4CQ9HCJ2 640 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 PHTF1Q9UMS5 762 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 SLC17A4Q9Y2C5 497 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 MAN2B2Q9Y2E5 1009 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 PCDHGC4Q9Y5F7 938 aa9.99□□□□□ -0.81
MDC1-202ENST00000416571 TRBV23OR9-2A0A075B6M9 112 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 LOC101059948A0A1B0GTJ6 334 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 TTC24A2A3L6 582 aaPredicted RBP9.98□□□□□ -0.81
MDC1-202ENST00000416571 PRPSAP2O60256 369 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 RNF8O76064 485 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 ASMTLO95671 621 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 TEAD1P28347 426 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 MAPK9P45984 424 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 MC2RQ01718 297 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 ABHD18Q0P651 414 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 KLRB1Q12918 225 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 CA9Q16790 459 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 C4orf17Q53FE4 359 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 Q6ZVL8 140 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 MARK2Q7KZI7 788 aaKnown RBP9.98□□□□□ -0.81
MDC1-202ENST00000416571 HSD11B1LQ7Z5J1 315 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 GALNT13Q8IUC8 556 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 UNC5BQ8IZJ1 945 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 NEK11Q8NG66 645 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 SLC37A2Q8TED4 501 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 NSMCE1Q8WV22 266 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 NCSTNQ92542 709 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 SPOCK2Q92563 424 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 AP2M1Q96CW1 435 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 NUDCD1Q96RS6 583 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 AGPAT1Q99943 283 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 SNRNP25Q9BV90 132 aaKnown RBP9.98□□□□□ -0.81
MDC1-202ENST00000416571 CLSTN2Q9H4D0 955 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 PCSK1NQ9UHG2 260 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 TMEM98Q9Y2Y6 226 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 PLEKHM1Q9Y4G2 1056 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 ST14Q9Y5Y6 855 aa9.98□□□□□ -0.81
MDC1-202ENST00000416571 TCRBV5S1A1TA0A578 114 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 BLACEA4D250 179 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 CLEC18AA5D8T8 446 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 NPIPB15A6NHN6 443 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 PRR19A6NJB7 356 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 MKRN2OSH3BPM6 223 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 POLR1CO15160 346 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 EPHB6O15197 1021 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 STK17BO94768 372 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 MAP3K6O95382 1288 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 PYGLP06737 847 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 CCDC172P0C7W6 258 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 SLC2A4P14672 509 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 LHCGRP22888 699 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 OAS2P29728 719 aaKnown RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 ZNF135P52742 658 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 HHEXQ03014 270 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 DPTQ07507 201 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 CT47A1Q5JQC4 288 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 ARMC12Q5T9G4 340 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 PPP1R2P3Q6NXS1 205 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 WDR74Q6RFH5 385 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 CLEC18BQ6UXF7 455 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 ARHGAP22Q7Z5H3 698 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 ARHGAP12Q8IWW6 846 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms