RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ITGA2BP08514 1039 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 ARHGAP25P42331 645 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 GNPDA1P46926 289 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 TMPRSS3P57727 454 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 SLC10A2Q12908 348 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 IHHQ14623 411 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 ADAMTSL4Q6UY14 1074 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 RAB11FIP2Q7L804 512 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 SPRED1Q7Z699 444 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 B3GNT8Q7Z7M8 397 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 C17orf82Q86X59 251 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 VSIG1Q86XK7 387 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 VSTM4Q8IW00 320 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 NRSN1Q8IZ57 195 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 ZDHHC1Q8WTX9 485 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 CCDC42Q96M95 316 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 SPATS2LQ9NUQ6 558 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 DTLQ9NZJ0 730 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 TAAR2Q9P1P5 351 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 CD84Q9UIB8 345 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 NBEAQ8NFP9 2946 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 A0A0U1RQS6 177 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 PMS2P1A4D2B8 440 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 CAPN8A6NHC0 703 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 ATXN7O15265 892 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 ZW10O43264 779 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 PRLP01236 227 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 FGF1P05230 155 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 HLA-DQB2P05538 268 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 STC1P52823 247 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 ZFP36L1Q07352 338 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 NIPAL4Q0D2K0 466 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 RFLNAQ6ZTI6 216 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 SFTPA2Q8IWL1 248 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 RHOT2Q8IXI1 618 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 LRRN4Q8WUT4 740 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 SCARF2Q96GP6 870 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 SMIM14Q96QK8 99 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 LYSMD1Q96S90 227 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 CHP1Q99653 195 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 MAK16Q9BXY0 300 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 FOXP3Q9BZS1 431 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 TSPY26PQ9H489 355 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 NHEJ1Q9H9Q4 299 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 PCDH9Q9HC56 1237 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 ABHD10Q9NUJ1 306 aa17.52■□□□□ 0.4
PDLIM2-208ENST00000416159 FASNP49327 2511 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 MTA2O94776 668 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 CLDN7O95471 211 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 SOD1P00441 154 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 JCHAINP01591 159 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 AK4P27144 223 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 UGT1A5P35504 534 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 ADCY8P40145 1251 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 POLD2P49005 469 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 B4GALNT1Q00973 533 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 CTBSQ01459 385 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 PPIDQ08752 370 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 DOK6Q6PKX4 331 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 IGSF10Q6WRI0 2623 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 LPCAT1Q8NF37 534 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 SLC39A7Q92504 469 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 SCAMP4Q969E2 229 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 TMEM159Q96B96 161 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 CDH19Q9H159 772 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 ATXN7L1Q9ULK2 861 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 SSUH2Q9Y2M2 353 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 PCDHGA7Q9Y5G6 932 aa17.51■□□□□ 0.39
PDLIM2-208ENST00000416159 RHPN2P1A8MT19 583 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 MFAP3LO75121 409 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 ZFXP17010 805 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 MAZP56270 477 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 IFI35P80217 286 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 BIRC2Q13490 618 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 CLPPQ16740 277 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 ARHGAP40Q5TG30 622 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 LRRC38Q5VT99 294 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 SLC9A4Q6AI14 798 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 SLC30A9Q6PML9 568 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 ZNF438Q7Z4V0 828 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 PLD5Q8N7P1 536 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 EXD1Q8NHP7 514 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 PTCD2Q8WV60 388 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 OR2M4Q96R27 311 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 MLPHQ9BV36 600 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 RIOK2Q9BVS4 552 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 CPNE5Q9HCH3 593 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 TMEM98Q9Y2Y6 226 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 LOXL2Q9Y4K0 774 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 HEY1Q9Y5J3 304 aa17.5■□□□□ 0.39
PDLIM2-208ENST00000416159 KCNK1O00180 336 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 APOL1O14791 398 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 B4GAT1O43505 415 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 ECEL1O95672 775 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms