RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 SRP72O76094 671 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 PRAMEF1O95521 474 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 PYGLP06737 847 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 DCNP07585 359 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3HP0C7X1 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 C6P13671 934 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 BPIP17213 487 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 OGNP20774 298 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 ATP5DP30049 168 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 OXTRP30559 389 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 GP5P40197 560 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SPINT3P49223 89 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SERPINB9P50453 376 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ARSDP51689 593 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ADPRHP54922 357 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 RPS21P63220 83 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 ACVR1Q04771 509 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CACNG1Q06432 222 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ILF2Q12905 390 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 EFTUD2Q15029 972 aaKnown RBP eCLIP8.38□□□□□ -1.074e-26■■■□□ 18.8
RBM39-208ENST00000416108 TMED2Q15363 201 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CDKN3Q16667 212 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SETMARQ53H47 684 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 HSP90B2PQ58FF3 399 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 RNF187Q5TA31 235 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 LYPLAL1Q5VWZ2 237 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3GQ6DHY5 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ZNF470Q6ECI4 717 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3CQ6IPX1 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 NEPROQ6NW34 567 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 NEK5Q6P3R8 708 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TRMT10BQ6PF06 316 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 FAM151BQ6UXP7 276 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CYS1Q717R9 158 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TAS2R42Q7RTR8 314 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 HSD11B1LQ7Z5J1 315 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SLC26A11Q86WA9 606 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 LRRC6Q86X45 466 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 NRSN1Q8IZ57 195 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3Q8IZP1 549 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 CAMKK1Q8N5S9 505 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 OR2W6PQ8NHA6 318 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 ULK4Q96C45 1275 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 PLEKHG4BQ96PX9 1271 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CPNE1Q99829 537 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SPATA16Q9BXB7 569 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 STMN4Q9H169 189 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 CCDC68Q9H2F9 335 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 EPB41L4BQ9H329 900 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 KDM4CQ9H3R0 1056 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CENPHQ9H3R5 247 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 FAM83DQ9H4H8 585 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ASB8Q9H765 288 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SGK2Q9HBY8 427 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CD248Q9HCU0 757 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 SPATA6Q9NWH7 488 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 MOCS1Q9NZB8 636 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 IL1RAPL1Q9NZN1 696 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 VPS18Q9P253 973 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 PSMC3IPQ9P2W1 217 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 FETUBQ9UGM5 382 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CD84Q9UIB8 345 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ZFC3H1O60293 1989 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 SPAG17Q6Q759 2223 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TECTAO75443 2155 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 C5orf42Q9H799 3197 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 A0A0U1RQS6 177 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 A0A1W2PQU0 124 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 TMEM221A6NGB7 291 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 OR51F1A6NGY5 319 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 GOLGA8CPA6NN73 597 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 GOLGA8KD6RF30 607 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 F8W8V4 182 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 GOLGA8TH3BQL2 631 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 M0R296 226 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 RGS16O15492 202 aaPredicted RBP8.37□□□□□ -1.07
RBM39-208ENST00000416108 RNGTTO60942 597 aaKnown RBP8.37□□□□□ -1.07
RBM39-208ENST00000416108 NDUFS2O75306 463 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 CDH16O75309 829 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 NDUFS3O75489 264 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 KRT37O76014 449 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 KRT38O76015 456 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 SEMA4FO95754 770 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 SHBGP04278 402 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 AOC1P19801 751 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 CNTFP26441 200 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 SPRP35270 261 aaPredicted RBP8.37□□□□□ -1.07
RBM39-208ENST00000416108 ETV3P41162 512 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 SLC1A2P43004 574 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 GPR1P46091 355 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 SLCO1A2P46721 670 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 CD151P48509 253 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 TTPAP49638 278 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 TPMTP51580 245 aa8.37□□□□□ -1.07
RBM39-208ENST00000416108 CSE1LP55060 971 aaKnown RBP8.37□□□□□ -1.07
RBM39-208ENST00000416108 DCDC1P59894 354 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms