RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 DPYSQ14117 519 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 LBRQ14739 615 aaKnown RBP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 PDK2Q15119 407 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 CAMK1DQ8IU85 385 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 CCDC74BQ96LY2 380 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 ZNF599Q96NL3 588 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 TUBGCP5Q96RT8 1024 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 CHP1Q99653 195 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 LGR4Q9BXB1 951 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 ATP13A3Q9H7F0 1226 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 PDFQ9HBH1 243 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 SPATS2LQ9NUQ6 558 aaKnown RBP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 PTPN13Q12923 2485 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 DOPEY2Q9Y3R5 2298 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 PRSS38A1L453 326 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 HGSO14964 777 aaPredicted RBP13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 MFAP3LO75121 409 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 TMEM253P0C7T8 217 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 GP1BBP13224 206 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 TCF4P15884 667 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 UGT1A3P35503 534 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 RGRP47804 291 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 FOXK1P85037 733 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 ZNF235Q14590 738 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 MESDQ14696 234 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 AFMIDQ63HM1 303 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 BRAT1Q6PJG6 821 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 LRRC49Q8IUZ0 686 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 PELI3Q8N2H9 469 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 ATPAF2Q8N5M1 289 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 TSEN2Q8NCE0 465 aaKnown RBP13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 SLC35G2Q8TBE7 412 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 KIAA1524Q8TCG1 905 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 MAK16Q9BXY0 300 aaKnown RBP13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 PACSIN1Q9BY11 444 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 HAUS2Q9NVX0 235 aa13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 RCOR3Q9P2K3 495 aaPredicted RBP13.22□□□□□ -0.29
CTHRC1-202ENST00000415886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 TNFRSF10CO14798 259 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ELFN1P0C7U0 828 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 GM2AP17900 193 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 CR2P20023 1033 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 KELP23276 732 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 NFKBIAP25963 317 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 HSPA9P38646 679 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 CASRP41180 1078 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ARHGAP25P42331 645 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ITKQ08881 620 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 NR1D2Q14995 579 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ASTE1Q2TB18 679 aaPredicted RBP13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 MARC1Q5VT66 337 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 TXNRD3NBQ6F5E7 133 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 LIPIQ6XZB0 460 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ZNF438Q7Z4V0 828 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 C17orf82Q86X59 251 aaPredicted RBP13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 NRROSQ86YC3 692 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ARHGAP12Q8IWW6 846 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 NPWQ8N729 165 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 PATE1Q8WXA2 126 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 ART4Q93070 314 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 WDR26Q9H7D7 661 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 SPTLC3Q9NUV7 552 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 PCDHGA3Q9Y5H0 932 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 B3GALT1Q9Y5Z6 326 aa13.21□□□□□ -0.29
CTHRC1-202ENST00000415886 A0A1W2PQ67 120 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 A8MX80 341 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 ECEL1O95672 775 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 FGF1P05230 155 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 HOXC4P09017 264 aaPredicted RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CCNB1P14635 433 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 MPSTP25325 297 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 AK4P27144 223 aaPredicted RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CD1CP29017 333 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 TRIM23P36406 574 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CCR10P46092 362 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 AP1S1P61966 158 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 SLC25A11Q02978 314 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 SLC10A7Q0GE19 358 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 ANKRD20A8PQ5CZ79 823 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 NKAIN2Q5VXU1 208 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 SARM1Q6SZW1 724 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CLEC18BQ6UXF7 455 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 NDUFAF2Q8N183 169 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms