RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 POLR1EQ9GZS1 481 aaKnown RBP20.47■□□□□ 0.87
PTPRU-203ENST00000415600 SYNDIG1Q9H7V2 258 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 NOD2Q9HC29 1040 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 SIRPGQ9P1W8 387 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 MX2P20592 715 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 MAN1A1P33908 653 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 TRIM23P36406 574 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 MLLT3P42568 568 aaPredicted RBP20.46■□□□□ 0.87
PTPRU-203ENST00000415600 VSNL1P62760 191 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 PNCKQ6P2M8 343 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 IGF2-ASQ6U949 168 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 TAF8Q7Z7C8 310 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 TP53INP2Q8IXH6 220 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 ARL14Q8N4G2 192 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 FUBP1Q96AE4 644 aaKnown RBP20.46■□□□□ 0.87
PTPRU-203ENST00000415600 NAP1L3Q99457 506 aaPredicted RBP20.46■□□□□ 0.87
PTPRU-203ENST00000415600 LRRC1Q9BTT6 524 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 AMACRQ9UHK6 382 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 DNPEPQ9ULA0 475 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 PNMA8BQ9ULN7 279 aaPredicted RBP20.46■□□□□ 0.87
PTPRU-203ENST00000415600 ASXL3Q9C0F0 2248 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 A8MX80 341 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 ZW10O43264 779 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 HEXIM1O94992 359 aaKnown RBP20.46■□□□□ 0.87
PTPRU-203ENST00000415600 PEX11BO96011 259 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 MARCKSL1P49006 195 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 UCNP55089 124 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 C8orf74Q6P047 294 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 CPNE8Q86YQ8 564 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 KYQ8NBH2 561 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 PLA2G15Q8NCC3 412 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 FAM71BQ8TC56 605 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 CCDC97Q96F63 343 aaPredicted RBP20.46■□□□□ 0.87
PTPRU-203ENST00000415600 SCRN2Q96FV2 425 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 PDXPQ96GD0 296 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 STRADBQ9C0K7 418 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 NT5MQ9NPB1 228 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 MOSPD1Q9UJG1 213 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 PCDHGA8Q9Y5G5 932 aa20.46■□□□□ 0.87
PTPRU-203ENST00000415600 ERLIN1O75477 346 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 PGLSO95336 258 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 MYCLP1P12525 358 aaPredicted RBP20.45■□□□□ 0.86
PTPRU-203ENST00000415600 GJC1P36383 396 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 GARSP41250 739 aaKnown RBP20.45■□□□□ 0.86
PTPRU-203ENST00000415600 CNGA3Q16281 694 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 C3orf38Q5JPI3 329 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 PERM1Q5SV97 790 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 TXNRD3NBQ6F5E7 133 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 CRTC1Q6UUV9 634 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 WDR36Q8NI36 951 aaKnown RBP20.45■□□□□ 0.86
PTPRU-203ENST00000415600 COQ10AQ96MF6 247 aa20.45■□□□□ 0.86
PTPRU-203ENST00000415600 GFM1Q96RP9 751 aaKnown RBP20.45■□□□□ 0.86
PTPRU-203ENST00000415600 ANKRD36A6QL64 1941 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 FGGP02679 453 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 PYGLP06737 847 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 CELA2BP08218 269 aaPredicted RBP20.44■□□□□ 0.86
PTPRU-203ENST00000415600 ITPKBP27987 946 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 EPHB1P54762 984 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 RWDD2BP57060 319 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 GALNT2Q10471 571 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 EIF3IQ13347 325 aaKnown RBP20.44■□□□□ 0.86
PTPRU-203ENST00000415600 DPYSL3Q14195 570 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 SEL1L2Q5TEA6 688 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 DENND2CQ68D51 928 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 PGBD5Q8N414 524 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 TEX26Q8N6G2 289 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 FAM46DQ8NEK8 389 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 FATE1Q969F0 183 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 DTD2Q96FN9 168 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 ATXN7L3BQ96GX2 97 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 UBL7Q96S82 380 aaPredicted RBP20.44■□□□□ 0.86
PTPRU-203ENST00000415600 CYP4F12Q9HCS2 524 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 SATB2Q9UPW6 733 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 RAI2Q9Y5P3 530 aa20.44■□□□□ 0.86
PTPRU-203ENST00000415600 LRRK1Q38SD2 2015 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 GOLGA6CA6NDK9 693 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 GOLGA6BA6NDN3 693 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 TMEM202A6NGA9 273 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 ZRANB2O95218 330 aaKnown RBP eCLIP20.43■□□□□ 0.86
PTPRU-203ENST00000415600 GOLGA6DP0CG33 693 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 TEAD1P28347 426 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 MAXP61244 160 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 TRAF2Q12933 501 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 PAFAH1B3Q15102 231 aaKnown RBP20.43■□□□□ 0.86
PTPRU-203ENST00000415600 TCEA2Q15560 299 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 LONRF2Q1L5Z9 754 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 ANKRD20A8PQ5CZ79 823 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 KCNE4Q8WWG9 221 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 OR1E3Q8WZA6 343 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 CCDC74AQ96AQ1 378 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 MCCC1Q96RQ3 725 aaPredicted RBP20.43■□□□□ 0.86
PTPRU-203ENST00000415600 KRT12Q99456 494 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 SEMA3CQ99985 751 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 DPH1Q9BZG8 443 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 DPEP2Q9H4A9 486 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 FGF22Q9HCT0 170 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 ARFGAP3Q9NP61 516 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 ZNF446Q9NWS9 450 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 GOLGA6AQ9NYA3 693 aa20.43■□□□□ 0.86
PTPRU-203ENST00000415600 ENTPD2Q9Y5L3 495 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms