RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ST8SIA5O15466 376 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 CST3P01034 146 aaPredicted RBP20.39■□□□□ 0.85
AP1S3-205ENST00000415298 C4BPAP04003 597 aaKnown RBP20.39■□□□□ 0.85
AP1S3-205ENST00000415298 MATN1P21941 496 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 AQP5P55064 265 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 TDRD10Q5VZ19 366 aaKnown RBP20.39■□□□□ 0.85
AP1S3-205ENST00000415298 GJB7Q6PEY0 223 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 FAM124AQ86V42 546 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 BANPQ8N9N5 519 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 OR8K3Q8NH51 312 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 TNIP3Q96KP6 325 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 GCNT4Q9P109 453 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 SDR42E2A6NKP2 422 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 PDGFAP04085 211 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 PTPN1P18031 435 aaKnown RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 TSPAN7P41732 249 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ERVK-21P61565 698 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 MYL7Q01449 175 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 SLC13A2Q13183 592 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 PM20D1Q6GTS8 502 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 DPY19L2P1Q6NXN4 242 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 KCTD8Q6ZWB6 473 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ZNF438Q7Z4V0 828 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 TMEM35BQ8NCS4 154 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ZFP90Q8TF47 636 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 GTF2H4Q92759 462 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 DLG3Q92796 817 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 TWNKQ96RR1 684 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 PI4K2AQ9BTU6 479 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 C12orf65Q9H3J6 166 aaKnown RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 DLGAP3O95886 979 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ATF7P17544 494 aaPredicted RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 UQCRC1P31930 480 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 MAPK10P53779 464 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 SSTP61278 116 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 PPP2R5DQ14738 602 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 C10orf62Q5T681 223 aaPredicted RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 KRT39Q6A163 491 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 DENND5BQ6ZUT9 1274 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ARID3BQ8IVW6 561 aaPredicted RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 LMO3Q8TAP4 145 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 NKD2Q969F2 451 aaPredicted RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ZNF578Q96N58 590 aaPredicted RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 CGRRF1Q99675 332 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 ZSWIM1Q9BR11 485 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 MTRRQ9UBK8 725 aa20.38■□□□□ 0.85
AP1S3-205ENST00000415298 EIF3KQ9UBQ5 218 aaKnown RBP20.38■□□□□ 0.85
AP1S3-205ENST00000415298 A0A0U1RQF3 1178 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 OR6C65A6NJZ3 312 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 ITGALP20701 1170 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 GP5P40197 560 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 NDST1P52848 882 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 VBP1P61758 197 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 ZNF544Q6NX49 715 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 C15orf39Q6ZRI6 1047 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 TMEM8AQ9HCN3 771 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 SDHAF3Q9NRP4 125 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 PCOLCE2Q9UKZ9 415 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 MMP8P22894 467 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 HOXC13P31276 330 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 ALDH7A1P49419 539 aaKnown RBP20.37■□□□□ 0.85
AP1S3-205ENST00000415298 DBPQ10586 325 aaPredicted RBP20.37■□□□□ 0.85
AP1S3-205ENST00000415298 CSTF3Q12996 717 aaKnown RBP20.37■□□□□ 0.85
AP1S3-205ENST00000415298 MMRN1Q13201 1228 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 ALKAL1Q6UXT8 129 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 HDAC11Q96DB2 347 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 GDF15Q99988 308 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 OR51B5Q9H339 312 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 EPS8L2Q9H6S3 715 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 SYBUQ9NX95 663 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 ALG6Q9Y672 507 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 RANBP2P49792 3224 aaKnown RBP20.37■□□□□ 0.85
AP1S3-205ENST00000415298 ALPK3Q96L96 1907 aa20.37■□□□□ 0.85
AP1S3-205ENST00000415298 APOL1O14791 398 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 PTP4A3O75365 173 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 CSF2RAP15509 400 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 MYL6P60660 151 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 ILF2Q12905 390 aaKnown RBP20.36■□□□□ 0.85
AP1S3-205ENST00000415298 FLOT2Q14254 428 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 ZACNQ401N2 412 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 GARNL3Q5VVW2 1013 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 MRPL10Q7Z7H8 261 aaKnown RBP20.36■□□□□ 0.85
AP1S3-205ENST00000415298 WDR49Q8IV35 697 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 ENKURQ8TC29 256 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 RSAD2Q8WXG1 361 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 SNAPC3Q92966 411 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 MIOSQ9NXC5 875 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 GLTPQ9NZD2 209 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 KIF17Q9P2E2 1029 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 CYP4F2P78329 520 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 CYP4F3Q08477 520 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 FSCBQ5H9T9 825 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 CACHD1Q5VU97 1274 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 PRR23BQ6ZRT6 265 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 C18orf25Q96B23 403 aaPredicted RBP20.36■□□□□ 0.85
AP1S3-205ENST00000415298 GAD1Q99259 594 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 SIX2Q9NPC8 291 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 RGS18Q9NS28 235 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 FETUBQ9UGM5 382 aa20.36■□□□□ 0.85
AP1S3-205ENST00000415298 AJAP1Q9UKB5 411 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms