RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 TRIM69Q86WT6 500 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 CBARPQ8N350 705 aaPredicted RBP13.08□□□□□ -0.32
CNOT4-204ENST00000414802 AENQ8WTP8 325 aaKnown RBP13.08□□□□□ -0.32
CNOT4-204ENST00000414802 PTCD2Q8WV60 388 aaKnown RBP13.08□□□□□ -0.32
CNOT4-204ENST00000414802 HDAC10Q969S8 669 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 TBATAQ96M53 351 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 ABCG8Q9H221 673 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 KDM4CQ9H3R0 1056 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 CA5BQ9Y2D0 317 aa13.08□□□□□ -0.32
CNOT4-204ENST00000414802 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 ZCWPW2A0A1B0GU75 182 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 CCDC162PA2VCL2 907 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 RAD51BO15315 384 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 MAP3K13O43283 966 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 USP1O94782 785 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 ACSL3O95573 720 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 SP9P0CG40 484 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 MCM3P25205 808 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 ARNTP27540 789 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 SSTR1P30872 391 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 SPAM1P38567 509 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 GPX6P59796 221 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 PDE1BQ01064 536 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 PEX6Q13608 980 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 IRF4Q15306 451 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 KYNUQ16719 465 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 SKIDA1Q1XH10 827 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 STEAP4Q687X5 459 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 NLRP9Q7RTR0 991 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 TMEFF1Q8IYR6 380 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 PNPLA1Q8N8W4 532 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 EIF1ADQ8N9N8 165 aaKnown RBP13.07□□□□□ -0.32
CNOT4-204ENST00000414802 UHMK1Q8TAS1 419 aaKnown RBP13.07□□□□□ -0.32
CNOT4-204ENST00000414802 AGAP2Q99490 1192 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 RIOK2Q9BVS4 552 aaKnown RBP13.07□□□□□ -0.32
CNOT4-204ENST00000414802 C1QTNF2Q9BXJ5 285 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 FAM96AQ9H5X1 160 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 VPS37BQ9H9H4 285 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 EBF2Q9HAK2 575 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 SLC17A6Q9P2U8 582 aa13.07□□□□□ -0.32
CNOT4-204ENST00000414802 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 C10orf142B7Z368 130 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 K7ESM1 405 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 VAPBO95292 243 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 PAK4O96013 591 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 GOT2P00505 430 aaKnown RBP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 POLBP06746 335 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 UQCRHP07919 91 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 MC4RP32245 332 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 CA5AP35218 305 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 PRAMEP78395 509 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 XIAPP98170 497 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 ACVR1Q04771 509 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 CBLBQ13191 982 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SGCGQ13326 291 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 CHRNA6Q15825 494 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 WSCD2Q2TBF2 565 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SPANXN3Q5MJ09 141 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 RAET1GQ6H3X3 334 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 TRMT10BQ6PF06 316 aaKnown RBP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 TMEM135Q86UB9 458 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SLC41A1Q8IVJ1 513 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 PALM2Q8IXS6 379 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 PLA2G15Q8NCC3 412 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 OR6P1Q8NGX9 317 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 CDKN2AIPNLQ96HQ2 116 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 LRFN3Q9BTN0 628 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SPATA16Q9BXB7 569 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 TXLNGYQ9BZA5 131 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SEMA4AQ9H3S1 761 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 FAM83DQ9H4H8 585 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 LRRC4CQ9HCJ2 640 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 IL26Q9NPH9 171 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 MBNL1Q9NR56 388 aaKnown RBP13.06□□□□□ -0.32
CNOT4-204ENST00000414802 RIMKLBQ9ULI2 386 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 MYO15AQ9UKN7 3530 aa13.06□□□□□ -0.32
CNOT4-204ENST00000414802 GLYATL1P3A0A0U1RQE8 302 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 MAGEB16A2A368 324 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 MEI4A8MW99 385 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 PIAS1O75925 651 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 PRAMEF1O95521 474 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 IGFALSP35858 605 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 HADHAP40939 763 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 CDKN1CP49918 316 aaPredicted RBP13.05□□□□□ -0.32
CNOT4-204ENST00000414802 PMS2P54278 862 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 SLMAPQ14BN4 828 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 ZRANB3Q5FWF4 1079 aa13.05□□□□□ -0.32
CNOT4-204ENST00000414802 HENMT1Q5T8I9 393 aaKnown RBP13.05□□□□□ -0.32
CNOT4-204ENST00000414802 NEK5Q6P3R8 708 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms