RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 HID1Q8IV36 788 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 KLHDC8BQ8IXV7 354 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 TRAM1L1Q8N609 369 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 BEND7Q8N7W2 519 aaPredicted RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 ARL10Q8N8L6 244 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 DCBLD1Q8N8Z6 715 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 GPR156Q8NFN8 814 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 GATA6Q92908 595 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 NXPE2Q96DL1 559 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 CCDC97Q96F63 343 aaPredicted RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 COX14Q96I36 57 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 ZNF514Q96K75 400 aaPredicted RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 AGAP3Q96P47 875 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 QKIQ96PU8 341 aaKnown RBP eCLIP6.37□□□□□ -1.39
USP54-202ENST00000413442 ALS2CR12Q96Q35 445 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 VPS35Q96QK1 796 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 TRIB3Q96RU7 358 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 FRMD8Q9BZ67 464 aaPredicted RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 GPR63Q9BZJ6 419 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 LACRTQ9GZZ8 138 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 ABCG8Q9H221 673 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 CARD9Q9H257 536 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 EPB41L1Q9H4G0 881 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 FZD3Q9NPG1 666 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 KLHL8Q9P2G9 620 aaPredicted RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 GGT7Q9UJ14 662 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 GPR34Q9UPC5 381 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 ITM2BQ9Y287 266 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 DRG1Q9Y295 367 aaKnown RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 CNOT1A5YKK6 2376 aaKnown RBP6.37□□□□□ -1.39
USP54-202ENST00000413442 PLXNB3Q9ULL4 1909 aa6.37□□□□□ -1.39
USP54-202ENST00000413442 KNTC1P50748 2209 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 PRSS38A1L453 326 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GRID2IPA4D2P6 1211 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 F8W8V4 182 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ZSCAN12O43309 604 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 HYAL3O43820 417 aaPredicted RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 OPA1O60313 960 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GCATO75600 419 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 DXOO77932 396 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 CLDN7O95471 211 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 CRTAMO95727 393 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GAS8O95995 478 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 MT-CO3P00414 261 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 PCCBP05166 539 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GSTM1P09488 218 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 TNNT1P13805 278 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GM2AP17900 193 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 VCLP18206 1134 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 LHCGRP22888 699 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 EIF3EP60228 445 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 ERVPABLB-1P60509 514 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 DYNLT1P63172 113 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GSTM4Q03013 218 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 WASHC5Q12768 1159 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 CAMK2BQ13554 666 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 RPS6KA1Q15418 735 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 SLC1A5Q15758 541 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 CCNG2Q16589 344 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ALG11Q2TAA5 492 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 GPR33Q49SQ1 333 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ANKRD20A2Q5SQ80 823 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 LDLRAP1Q5SW96 308 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 HENMT1Q5T8I9 393 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 SEL1L2Q5TEA6 688 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ANKRD20A1Q5TYW2 823 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ANKRD20A3Q5VUR7 823 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 CDCP2Q5VXM1 449 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 KAZNQ674X7 775 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 RAET1GQ6H3X3 334 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 DARS2Q6PI48 645 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 LAYNQ6UX15 382 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 HSD11B1LQ7Z5J1 315 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 TAF8Q7Z7C8 310 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ZC3H18Q86VM9 953 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 HEATR4Q86WZ0 1026 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 C17orf82Q86X59 251 aaPredicted RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 ZNF567Q8N184 647 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 LPCAT1Q8NF37 534 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ACTL9Q8TC94 416 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ZFPM2Q8WW38 1151 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 KRT35Q92764 455 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 PEX13Q92968 403 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 NSMCE3Q96MG7 304 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 ZNF578Q96N58 590 aaPredicted RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 TMEM74Q96NL1 305 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 NAP1L3Q99457 506 aaPredicted RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 MYOCQ99972 504 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 LRRC61Q9BV99 259 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 FSD1LQ9BXM9 530 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 TMEM121BQ9BXQ6 578 aaPredicted RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 ZCCHC2Q9C0B9 1178 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 STN1Q9H668 368 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 UCKL1Q9NWZ5 548 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 AKAP7Q9P0M2 348 aaPredicted RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 CA5BQ9Y2D0 317 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms