RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 MRNIPQ6NTE8 343 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 NEPROQ6NW34 567 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 HSD11B1LQ7Z5J1 315 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 HORMAD1Q86X24 394 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 LRRC6Q86X45 466 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 RIBC1Q8N443 379 aaPredicted RBP20.16■□□□□ 0.82
PTPA-208ENST00000411917 TRAM1L1Q8N609 369 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 TBATAQ96M53 351 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 TRIM56Q9BRZ2 755 aaKnown RBP20.16■□□□□ 0.82
PTPA-208ENST00000411917 DHRS4Q9BTZ2 278 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 IL26Q9NPH9 171 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 C20orf96Q9NUD7 363 aaPredicted RBP20.16■□□□□ 0.82
PTPA-208ENST00000411917 C2orf42Q9NWW7 574 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 BCCIPQ9P287 314 aaKnown RBP eCLIP20.16■□□□□ 0.82
PTPA-208ENST00000411917 VPS9D1Q9Y2B5 631 aa20.16■□□□□ 0.82
PTPA-208ENST00000411917 ZNF106Q9H2Y7 1883 aaKnown RBP20.16■□□□□ 0.82
PTPA-208ENST00000411917 TTC28Q96AY4 2481 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 GLYATL1P3A0A0U1RQE8 302 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 TM7SF2O76062 418 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 FOXN2P32314 431 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 PPARGP37231 505 aaPredicted RBP20.15■□□□□ 0.82
PTPA-208ENST00000411917 CCR5P51681 352 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 PTPRRQ15256 657 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 TYSND1Q2T9J0 566 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 LRRC73Q5JTD7 316 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 TEDDM1Q5T9Z0 273 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 RNF187Q5TA31 235 aaPredicted RBP20.15■□□□□ 0.82
PTPA-208ENST00000411917 ANO7Q6IWH7 933 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 TRMT10BQ6PF06 316 aaKnown RBP20.15■□□□□ 0.82
PTPA-208ENST00000411917 CES3Q6UWW8 571 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 SNX20Q7Z614 316 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 DENND6BQ8NEG7 585 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 OR14C36Q8NHC7 312 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 GANCQ8TET4 914 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 SLC44A1Q8WWI5 657 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.15■□□□□ 0.82
PTPA-208ENST00000411917 LENG8Q96PV6 779 aaPredicted RBP20.15■□□□□ 0.82
PTPA-208ENST00000411917 VPS35Q96QK1 796 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 HHIPQ96QV1 700 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 C1QTNF7Q9BXJ2 289 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 SLC6A17Q9H1V8 727 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 FAM83DQ9H4H8 585 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 ZFATQ9P243 1243 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 GGT7Q9UJ14 662 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 ITM2BQ9Y287 266 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 VCANP13611 3396 aa20.15■□□□□ 0.82
PTPA-208ENST00000411917 SCN8AQ9UQD0 1980 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 MYLKQ15746 1914 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 CCDC162PA2VCL2 907 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 PLK4O00444 970 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 PFDN6O15212 129 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 LATO43561 262 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 SRP72O76094 671 aaKnown RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 GOT2P00505 430 aaKnown RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 TDGF1P13385 188 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 ITGALP20701 1170 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 CSE1LP55060 971 aaKnown RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 ADARP55265 1226 aaKnown RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 NFATC2Q13469 925 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 THOC5Q13769 683 aaKnown RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 KBTBD12Q3ZCT8 623 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 CILP2Q8IUL8 1156 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 C2CD4AQ8NCU7 369 aaPredicted RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 GPR26Q8NDV2 337 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 ULK4Q96C45 1275 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 CPNE1Q99829 537 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 MCMBPQ9BTE3 642 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 CATSPERZQ9NTU4 200 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 INTS10Q9NVR2 710 aaKnown RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 WSB2Q9NYS7 404 aaPredicted RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 FKBPLQ9UIM3 349 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 CORO1CQ9ULV4 474 aaPredicted RBP20.14■□□□□ 0.81
PTPA-208ENST00000411917 SLC30A1Q9Y6M5 507 aa20.14■□□□□ 0.81
PTPA-208ENST00000411917 EXOC1LA0A1B0GW35 172 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 RECQL5O94762 991 aaPredicted RBP20.13■□□□□ 0.81
PTPA-208ENST00000411917 PRAMEF1O95521 474 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 PDGFBP01127 241 aaPredicted RBP20.13■□□□□ 0.81
PTPA-208ENST00000411917 CNTFP26441 200 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 CD6P30203 668 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 MC4RP32245 332 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 TTPAP49638 278 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 NUBP1P53384 320 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 ZNF284Q2VY69 593 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 HSP90AA5PQ58FG0 334 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 UBAP2Q5T6F2 1119 aaKnown RBP20.13■□□□□ 0.81
PTPA-208ENST00000411917 Q6ZVL8 140 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 SDCCAG8Q86SQ7 713 aaPredicted RBP20.13■□□□□ 0.81
PTPA-208ENST00000411917 CADM4Q8NFZ8 388 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 OR6P1Q8NGX9 317 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 HEXDCQ8WVB3 486 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 NUS1Q96E22 293 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 TTC1Q99614 292 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 FBXO4Q9UKT5 387 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 ZFR2Q9UPR6 939 aaKnown RBP20.13■□□□□ 0.81
PTPA-208ENST00000411917 PLAAQ9Y263 795 aa20.13■□□□□ 0.81
PTPA-208ENST00000411917 IGHV1OR15-9A0A0B4J2B8 117 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 TOR1BO14657 336 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 CD3EAPO15446 510 aaKnown RBP20.12■□□□□ 0.81
PTPA-208ENST00000411917 PI15O43692 258 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 BUD23O43709 281 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms