RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 GNPDA1P46926 289 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 CTBSQ01459 385 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 CLN3Q13286 438 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 SQSTM1Q13501 440 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 NR1D2Q14995 579 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 TMEM164Q5U3C3 297 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 NCBP2-AS2Q69YL0 99 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 XKR5Q6UX68 686 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 ZNF605Q86T29 641 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 JAMLQ86YT9 394 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 OR8K1Q8NGG5 319 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 AP2M1Q96CW1 435 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 DPYSL5Q9BPU6 564 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 GOLGA6AQ9NYA3 693 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 SEPT10Q9P0V9 454 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 IFNKQ9P0W0 207 aa14.47□□□□□ -0.09
MCF2L-210ENST00000409954 RGSL1A5PLK6 1076 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ECEL1O95672 775 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 PRB1P04280 392 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ALDH4A1P30038 563 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ADCY8P40145 1251 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 SLC18A3Q16572 532 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ZSCAN23Q3MJ62 389 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 LRRC66Q68CR7 880 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 PCSK4Q6UW60 755 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ZNF438Q7Z4V0 828 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 CCNYQ8ND76 341 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 FAF2Q96CS3 445 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 LYSMD1Q96S90 227 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 CDH19Q9H159 772 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ZNHIT6Q9NWK9 470 aaKnown RBP14.46□□□□□ -0.09
MCF2L-210ENST00000409954 ATXN7L1Q9ULK2 861 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-210ENST00000409954 NENFQ9UMX5 172 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 LOXL2Q9Y4K0 774 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 PCDHB11Q9Y5F2 797 aa14.46□□□□□ -0.09
MCF2L-210ENST00000409954 SSU72P8A0A1W2PR75 194 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 PMS2P1A4D2B8 440 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 KDELR1P24390 212 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 CD82P27701 267 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 MAN1A1P33908 653 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 POLD2P49005 469 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 STC1P52823 247 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 TRA2AQ13595 282 aaKnown RBP eCLIP14.45□□□□□ -0.1
MCF2L-210ENST00000409954 LRP8Q14114 963 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 PYCR3Q53H96 274 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 ZFYVE27Q5T4F4 411 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 USP53Q70EK8 1073 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 SLITRK4Q8IW52 837 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 ZNF843Q8N446 348 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 ARRDC2Q8TBH0 407 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 CCHCR1Q8TD31 782 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 RNF157Q96PX1 679 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 PCDH9Q9HC56 1237 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 PISDQ9UG56 409 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 CHKBQ9Y259 395 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 SHROOM3Q8TF72 1996 aa14.45□□□□□ -0.1
MCF2L-210ENST00000409954 ZNF487B1APH4 448 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 ANKRD66B4E2M5 251 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 HGSO14964 777 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 CBFA2T2O43439 604 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 MFSD11O43934 449 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 C1QL1O75973 258 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 PRLP01236 227 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 LIPCP11150 499 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 HGFP14210 728 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 AK4P27144 223 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 CD1CP29017 333 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 ACTR1BP42025 376 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 ARHGAP25P42331 645 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 MAZP56270 477 aaKnown RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 OR1D5P58170 312 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 ACTR1AP61163 376 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 DSC2Q02487 901 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 TRIM14Q14142 442 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 PTPRRQ15256 657 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 SKOR2Q2VWA4 1001 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 AMZ1Q400G9 498 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 PHF19Q5T6S3 580 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 SLC30A9Q6PML9 568 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 VSIG1Q86XK7 387 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 SFTPA2Q8IWL1 248 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 CCDC13Q8IYE1 715 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 NAGSQ8N159 534 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 PQLC3Q8N755 202 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 TTC9Q92623 222 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 SCAMP4Q969E2 229 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 HDAC11Q96DB2 347 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 ZNF830Q96NB3 372 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 OR2M4Q96R27 311 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 MLPHQ9BV36 600 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 RIOK2Q9BVS4 552 aaKnown RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 TDRD1Q9BXT4 1180 aaKnown RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 MAK16Q9BXY0 300 aaKnown RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 ADGRE3Q9BY15 652 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 SEMA6CQ9H3T2 930 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 DEF6Q9H4E7 631 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 FAM83DQ9H4H8 585 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 SUDS3Q9H7L9 328 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-210ENST00000409954 CD84Q9UIB8 345 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms