RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CEP95Q96GE4 821 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 OXNAD1Q96HP4 312 aaPredicted RBP5.52□□□□□ -1.53
CLK1-202ENST00000409403 TNIP3Q96KP6 325 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 NLRP4Q96MN2 994 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 PANX3Q96QZ0 392 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 CYTH2Q99418 400 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 CTRCQ99895 268 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 FERMT1Q9BQL6 677 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 NEURL2Q9BR09 285 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 APOL5Q9BWW9 433 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 TMEM120AQ9BXJ8 343 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 C11orf54Q9H0W9 315 aaPredicted RBP5.52□□□□□ -1.53
CLK1-202ENST00000409403 C12orf65Q9H3J6 166 aaKnown RBP5.52□□□□□ -1.53
CLK1-202ENST00000409403 STN1Q9H668 368 aaKnown RBP5.52□□□□□ -1.53
CLK1-202ENST00000409403 RETREG1Q9H6L5 497 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 ZNF287Q9HBT7 754 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 KLHL11Q9NVR0 708 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 POLLQ9UGP5 575 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 ANAPC5Q9UJX4 755 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 DNAJC12Q9UKB3 198 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 CDH7Q9ULB5 785 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 OAZ3Q9UMX2 235 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 RABL2BQ9UNT1 228 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 PLA2G4CQ9UP65 541 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 ERVK-11Q9UQG0 969 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 NEU2Q9Y3R4 380 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 CEPT1Q9Y6K0 416 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 FLT1P17948 1338 aa5.52□□□□□ -1.53
CLK1-202ENST00000409403 A0A1W2PPL8 197 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 TBKBP1A7MCY6 615 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 PROB1E7EW31 1015 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 I3L4J1 428 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 FCHO1O14526 889 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 KLF11O14901 512 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 KCNQ3O43525 872 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 CD1AP06126 327 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SRGAP2BP0DMP2 458 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 RAP2AP10114 183 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 CREB1P16220 341 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 CR2P20023 1033 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 JAK1P23458 1154 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SERPINB6P35237 376 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 STAT2P52630 851 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 GALCP54803 685 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 CSE1LP55060 971 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 CREMQ03060 361 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 KRT17Q04695 432 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 EIF2B5Q13144 721 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 NPY5RQ15761 445 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 MAPK6Q16659 721 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SMUG1Q53HV7 270 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SFT2D3Q587I9 215 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 ZNF362Q5T0B9 420 aaPredicted RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 DCAF12L1Q5VU92 463 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 RNF207Q6ZRF8 634 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 COPS6Q7L5N1 327 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 FRMD5Q7Z6J6 570 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SLC13A5Q86YT5 568 aaPredicted RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 ZC3H3Q8IXZ2 948 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 CENPSQ8N2Z9 138 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 DCBLD1Q8N8Z6 715 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 HM13Q8TCT9 377 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 BRIX1Q8TDN6 353 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 MED30Q96HR3 178 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 PLEKHA8Q96JA3 519 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 NAP1L4Q99733 375 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 DPYSL5Q9BPU6 564 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 TCF25Q9BQ70 676 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 THTPAQ9BU02 230 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 TDRD1Q9BXT4 1180 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 NYXQ9GZU5 481 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 DEFB129Q9H1M3 183 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SEC61A2Q9H9S3 476 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 ERVK-5Q9HDB9 667 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 SARS2Q9NP81 518 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 SLCO1B3Q9NPD5 702 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 CNNM1Q9NRU3 951 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 TRNAU1APQ9NX07 287 aaKnown RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 TMEM9Q9P0T7 183 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 CRNNQ9UBG3 495 aaPredicted RBP5.51□□□□□ -1.53
CLK1-202ENST00000409403 SLC7A8Q9UHI5 535 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 COG5Q9UP83 839 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 ATP11BQ9Y2G3 1177 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 IFT52Q9Y366 437 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 MAD1L1Q9Y6D9 718 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 ZNF532Q9HCE3 1301 aa5.51□□□□□ -1.53
CLK1-202ENST00000409403 GOLGA8MH3BSY2 632 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 F2RL2O00254 374 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 ALOX15BO15296 676 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 SLC16A3O15427 465 aaKnown RBP5.5□□□□□ -1.53
CLK1-202ENST00000409403 CDC14BO60729 498 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 BMP10O95393 424 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 CCDC159P0C7I6 412 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 MYF5P13349 255 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 EEF2P13639 858 aaKnown RBP5.5□□□□□ -1.53
CLK1-202ENST00000409403 MYL6BP14649 208 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 PRDX5P30044 214 aa5.5□□□□□ -1.53
CLK1-202ENST00000409403 ALDH3B2P48448 385 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms