RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ESX1Q8N693 406 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 RCBTB1Q8NDN9 531 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 ANKRD20A12PQ8NF67 263 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 GPT2Q8TD30 523 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 CENPIQ92674 756 aaPredicted RBP7.74□□□□□ -1.17
LSM5-202ENST00000409292 NUDT22Q9BRQ3 303 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.74□□□□□ -1.17
LSM5-202ENST00000409292 SIX2Q9NPC8 291 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 MRPL40Q9NQ50 206 aaKnown RBP7.74□□□□□ -1.17
LSM5-202ENST00000409292 ZNF71Q9NQZ8 489 aaPredicted RBP7.74□□□□□ -1.17
LSM5-202ENST00000409292 TAAR2Q9P1P5 351 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 LHX3Q9UBR4 397 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 VPS4AQ9UN37 437 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 KCTD3Q9Y597 815 aa7.74□□□□□ -1.17
LSM5-202ENST00000409292 FAM170AA1A519 330 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 F8VZ95 297 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FAM72CH0Y354 149 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 PSMD11O00231 422 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 EEF2KO00418 725 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 CASC3O15234 703 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 PRAMEF11O60813 436 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 GFPT2O94808 682 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 CYP1A1P04798 512 aaPredicted RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 PRKCGP05129 697 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FGF1P05230 155 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 PRKAR1AP10644 381 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FGF3P11487 239 aaPredicted RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 EEF1GP26641 437 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 ACTR1BP42025 376 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 SCNN1BP51168 640 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 ZNF143P52747 638 aaPredicted RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 HDAC4P56524 1084 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 ACTR1AP61163 376 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 SRSF11Q05519 484 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 ABHD18Q0P651 414 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 SQSTM1Q13501 440 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 LRP8Q14114 963 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 ZNF235Q14590 738 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 NR1D2Q14995 579 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FAM72AQ5TYM5 149 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 AFMIDQ63HM1 303 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 ZNF385CQ66K41 422 aaPredicted RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 DENND2CQ68D51 928 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FAM72DQ6L9T8 149 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 C16orf46Q6P387 395 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 LIPIQ6XZB0 460 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 USP45Q70EL2 814 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 ZNF438Q7Z4V0 828 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 HEATR4Q86WZ0 1026 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FAM72BQ86X60 149 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 LURAP1LQ8IV03 231 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 CCDC185Q8N715 623 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 PLA2G15Q8NCC3 412 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 C3orf20Q8ND61 904 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 PDCD6IPQ8WUM4 868 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 HTR3CQ8WXA8 447 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 OR2M4Q96R27 311 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 CNPY3Q9BT09 278 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 GRIP2Q9C0E4 1043 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 EPB41L1Q9H4G0 881 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 SPATS2LQ9NUQ6 558 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 G3BP2Q9UN86 482 aaKnown RBP7.73□□□□□ -1.17
LSM5-202ENST00000409292 B3GALT1Q9Y5Z6 326 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 FHOD1Q9Y613 1164 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 TENM4Q6N022 2769 aa7.73□□□□□ -1.17
LSM5-202ENST00000409292 IGHV1OR21-1A0A087WYE8 117 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 SIGLEC16A6NMB1 481 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 ENO4A6NNW6 628 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 DFFAO00273 331 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 POLR1CO15160 346 aaPredicted RBP7.72□□□□□ -1.17
LSM5-202ENST00000409292 SOCS5O75159 536 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 RNF8O76064 485 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 AGFG2O95081 481 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 ASMTLO95671 621 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 CPP00450 1065 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 IVLP07476 585 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 THRAP10827 490 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 WT1P19544 449 aaPredicted RBP7.72□□□□□ -1.17
LSM5-202ENST00000409292 CA4P22748 312 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 TEAD1P28347 426 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 CD1CP29017 333 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 VIPR1P32241 457 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 RFC1P35251 1148 aaPredicted RBP7.72□□□□□ -1.17
LSM5-202ENST00000409292 SOX5P35711 763 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 GPR1P46091 355 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 PAPOLAP51003 745 aaKnown RBP7.72□□□□□ -1.17
LSM5-202ENST00000409292 CTBSQ01459 385 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 IL10RBQ08334 325 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 CDC20Q12834 499 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 IGFBP7Q16270 282 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 DEFB109BQ30KR1 87 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 CRTC2Q53ET0 693 aaPredicted RBP7.72□□□□□ -1.17
LSM5-202ENST00000409292 SNAP47Q5SQN1 464 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 ANKS6Q68DC2 871 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 TRNP1Q6NT89 227 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 WDR59Q6PJI9 974 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 C17orf82Q86X59 251 aaPredicted RBP7.72□□□□□ -1.17
LSM5-202ENST00000409292 GALNT13Q8IUC8 556 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 NETO2Q8NC67 525 aa7.72□□□□□ -1.17
LSM5-202ENST00000409292 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms