RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 EPS8Q12929 822 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CDC16Q13042 620 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 LCP2Q13094 533 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MSS51Q4VC12 460 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 NAIF1Q69YI7 327 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 TTC33Q6PID6 262 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ZNF280BQ86YH2 543 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 FSTL5Q8N475 847 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ZBTB2Q8N680 514 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 FITM2Q8N6M3 262 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 DCAF4L2Q8NA75 395 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 OR6Y1Q8NGX8 325 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CLP1Q92989 425 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MED8Q96G25 268 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 VPS50Q96JG6 964 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 TCF25Q9BQ70 676 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 NMUR2Q9GZQ4 415 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 FAM83DQ9H4H8 585 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MIEF1Q9NQG6 463 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ARL8BQ9NVJ2 186 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 FLRT1Q9NZU1 646 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 C6orf203Q9P0P8 240 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MTRRQ9UBK8 725 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 GJD2Q9UKL4 321 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MYO1GB0I1T2 1018 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PRR5-ARHGAP8B1AHC4 643 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CCL16O15467 120 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 KCNH1O95259 989 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 TBX18O95935 607 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 HNRNPLP14866 589 aaKnown RBP eCLIP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ZNF23P17027 643 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PPIBP23284 216 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 EPHA3P29320 983 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 GPC1P35052 558 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CHI3L1P36222 383 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 SLC1A2P43004 574 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MAGEA6P43360 314 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 GPR15P49685 360 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PTPN5P54829 565 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 RPS24P62847 133 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ARHGAP8P85298 464 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 SLC25A3Q00325 362 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 USP4Q13107 963 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 STEAP4Q687X5 459 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 RAET1GQ6H3X3 334 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PATL1Q86TB9 770 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ALYREFQ86V81 257 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PACS2Q86VP3 889 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CAND1Q86VP6 1230 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CYP4Z1Q86W10 505 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ZC3HC1Q86WB0 502 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CIR1Q86X95 450 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 SYT12Q8IV01 421 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 BBS7Q8IWZ6 715 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 COLGALT2Q8IYK4 626 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ULK2Q8IYT8 1036 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PCDH20Q8N6Y1 951 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 OR10T2Q8NGX3 314 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 GDPD5Q8WTR4 605 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 SLC22A17Q8WUG5 538 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 C10orf82Q8WW14 230 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 OTUB2Q96DC9 234 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PIWIL1Q96J94 861 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 GPR21Q99679 349 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 YIPF3Q9GZM5 350 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 OSGEPL1Q9H4B0 414 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CCSER2Q9H7U1 834 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 C8orf4Q9NR00 106 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 DLGAP2Q9P1A6 1054 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ENOPH1Q9UHY7 261 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 ZMYND8Q9ULU4 1186 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CLCA2Q9UQC9 943 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PCDHGC4Q9Y5F7 938 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 INSL5Q9Y5Q6 135 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 MYH15Q9Y2K3 1946 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 PHIPQ8WWQ0 1821 aa4.73□□□□□ -1.65
PCDH11X-207ENST00000406881 CACNA1GO43497 2377 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 CCDC162PA2VCL2 907 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 NRP2O60462 931 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 TPST1O60507 370 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 PEX11AO75192 247 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 TM7SF2O76062 418 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 PDE5AO76074 875 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 SLC25A14O95258 325 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 BMP10O95393 424 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 CPSF4O95639 269 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 APODP05090 189 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 UGT2B4P06133 528 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 SPATA31D3P0C874 917 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 PFKLP17858 780 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 KELP23276 732 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 GRIA1P42261 906 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 NSG1P42857 185 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 SERPINB10P48595 397 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 NRG1Q02297 640 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 LRRC74AQ0VAA2 488 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 CSTF3Q12996 717 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 UBAP2LQ14157 1087 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 HERC3Q15034 1050 aa4.72□□□□□ -1.65
PCDH11X-207ENST00000406881 CARD16Q5EG05 197 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms