RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TSPAN8P19075 237 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 MATKP42679 507 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 PSME3P61289 254 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 FKBP1AP62942 108 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 DLG1Q12959 904 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 CCDC80Q76M96 950 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SPATA19Q7Z5L4 167 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GAS2L1Q99501 681 aaPredicted RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GSDMCQ9BYG8 508 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 RAPGEFL1Q9UHV5 662 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 PDK3Q15120 406 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 KCTD21Q4G0X4 260 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 C9orf64Q5T6V5 341 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 TCEAL6Q6IPX3 200 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 UBE2R2Q712K3 238 aaPredicted RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 C12orf56Q8IXR9 622 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 KIAA0319LQ8IZA0 1049 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SFRP1Q8N474 314 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 AENQ8WTP8 325 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 TSEN15Q8WW01 171 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 UGT2B11O75310 529 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 GJB6O95452 261 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 CYP1A2P05177 515 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 ALAS2P22557 587 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 ENPEPQ07075 957 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 FKBP1CQ5VVH2 108 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 DNASE1L2Q92874 299 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.48
SMCR8-201ENST00000406438 USP20Q9Y2K6 914 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 ARHGEF33A8MVX0 844 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 FPGTO14772 594 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 APODP05090 189 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 ITGA2BP08514 1039 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 ZSCAN5DPP0CG00 497 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 TSHRP16473 764 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 GSTT1P30711 240 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 AIF1P55008 147 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 MAP1SQ66K74 1059 aaPredicted RBP12.02□□□□□ -0.48
SMCR8-201ENST00000406438 FRRS1Q6ZNA5 592 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 TIFAQ96CG3 184 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 CHCHD6Q9BRQ6 235 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 TRPS1Q9UHF7 1281 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.48
SMCR8-201ENST00000406438 EFR3BQ9Y2G0 817 aa12.02□□□□□ -0.48
SMCR8-201ENST00000406438 MDM4O15151 490 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 TLR5O60602 858 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 GATBO75879 557 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 SNX4O95219 450 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CXCL14O95715 111 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CXCL9Q07325 125 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 PLA2G4EQ3MJ16 856 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CCNYL2Q5T2Q4 361 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CAPN13Q6MZZ7 669 aaPredicted RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 RNF31Q96EP0 1072 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 C2CD2Q9Y426 696 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 TRIM38O00635 465 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 TRBC1P01850 177 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 ABHD2P08910 425 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 C10orf107Q8IVU9 208 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 MAB21L3Q8N8X9 362 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 RIT1Q92963 219 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 FATE1Q969F0 183 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 SNRNP25Q9BV90 132 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 ZNF490Q9ULM2 529 aaPredicted RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 ADM5C9JUS6 153 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 MEA1Q16626 185 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 BEND5Q7L4P6 421 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 TLR10Q9BXR5 811 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 GLIS2Q9BZE0 524 aaPredicted RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CST11Q9H112 138 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 PTDSS1P48651 473 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CRYBB1P53674 252 aaPredicted RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 ACAP2Q15057 778 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 OR5T3Q8NGG3 340 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 PIK3R3Q92569 461 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CHST7Q9NS84 486 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 CCDC59Q9P031 241 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 MTRRQ9UBK8 725 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 C22orf31O95567 290 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 UBA1P22314 1058 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 ABCG1P45844 678 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 POTEHQ6S545 545 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 RBM23Q86U06 439 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 TRPV1Q8NER1 839 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 EXOC2Q96KP1 924 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 COPS8Q99627 209 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 RBM4BQ9BQ04 359 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 RBM4Q9BWF3 364 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 DUSP16Q9BY84 665 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 BRINP2Q9C0B6 783 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 ALKBH4Q9NXW9 302 aa12.02□□□□□ -0.49
SMCR8-201ENST00000406438 PRPF19Q9UMS4 504 aaKnown RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 POLR3HQ9Y535 204 aaPredicted RBP12.02□□□□□ -0.49
SMCR8-201ENST00000406438 AZIN1O14977 448 aa12.01□□□□□ -0.49
SMCR8-201ENST00000406438 C9P02748 559 aa12.01□□□□□ -0.49
SMCR8-201ENST00000406438 ERBB2P04626 1255 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms