RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PIP4K2CQ8TBX8 421 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 CANT1Q8WVQ1 401 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 DGCR14Q96DF8 476 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 CCDC126Q96EE4 140 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 C8orf48Q96LL4 319 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 CIB1Q99828 191 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 ABI2Q9NYB9 513 aaPredicted RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 EPS15L1Q9UBC2 864 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 GABRQQ9UN88 632 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 A0A0D9SEW6 157 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MOXD2PA6NHM9 499 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 M0QZ92 97 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 TNFAIP8O95379 198 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 CLPTM1O96005 669 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 PIRTP0C851 137 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MRPL19P49406 292 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 HK3P52790 923 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 TBX4P57082 545 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MRPL58Q14197 206 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 PTPRRQ15256 657 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MAPRE1Q15691 268 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 C5orf22Q49AR2 442 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 FBXO48Q5FWF7 155 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 LAYNQ6UX15 382 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MON1AQ86VX9 555 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 SLC22A9Q8IVM8 553 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 SLC15A3Q8IY34 581 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MYO1HQ8N1T3 1032 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 TWIST2Q8WVJ9 160 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 PABPC5Q96DU9 382 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 RPL10LQ96L21 214 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 UROC1Q96N76 676 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 BIRC8Q96P09 236 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 ANKRD60Q9BZ19 345 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 NOL11Q9H8H0 719 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 RGS18Q9NS28 235 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 TRMT13Q9NUP7 481 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 PTTG2Q9NZH5 202 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 GPR45Q9Y5Y3 372 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 ARHGAP10A1A4S6 786 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 H0Y858 1186 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 PRAMEF11O60813 436 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 TIPRLO75663 272 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 PRLP01236 227 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 BMP2P12643 396 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 ATP6V1B1P15313 513 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 CKMT2P17540 419 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 CDH2P19022 906 aaPredicted RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 SLC6A2P23975 617 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 XKR7Q5GH72 579 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 UGT3A1Q6NUS8 523 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 CATSPER1Q8NEC5 780 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 MDGA1Q8NFP4 955 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 RHEBL1Q8TAI7 183 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 CALML6Q8TD86 181 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 UPF1Q92900 1129 aaKnown RBP eCLIP9.82□□□□□ -0.84
MSH2-202ENST00000406134 B3GALT6Q96L58 329 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 AARSD1Q9BTE6 412 aaKnown RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 TRMOQ9BU70 441 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 EML4Q9HC35 981 aaKnown RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 TLR9Q9NR96 1032 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 SDR39U1Q9NRG7 319 aaPredicted RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 AGPAT4Q9NRZ5 378 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 USP22Q9UPT9 525 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 A0A0J9YYE9 177 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 IQCA1LA6NCM1 817 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 ZNF839A8K0R7 811 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 H3BNH8 94 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 TMEM189-UBE2V1I3L0A0 370 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 KLK8O60259 260 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 MATN4O95460 622 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 F11P03951 625 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 FAM58BPP0C7Q3 252 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 ETFBP38117 255 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 STC1P52823 247 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 EMP3P54852 163 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 NME5P56597 212 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 PRKCQQ04759 706 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 IL10RBQ08334 325 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 STX5Q13190 355 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 FIBCD1Q8N539 461 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 PTGR2Q8N8N7 351 aaPredicted RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 TFAP2CQ92754 450 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 ISG20Q96AZ6 181 aaKnown RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 CYP2S1Q96SQ9 504 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 SLC25A23Q9BV35 468 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 HEMK1Q9Y5R4 338 aaPredicted RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 H3BSA7 217 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 CD3EAPO15446 510 aaKnown RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 SUPT7LO94864 414 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 ASGR1P07306 291 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 RPS17P08708 135 aaKnown RBP9.82□□□□□ -0.84
MSH2-202ENST00000406134 ZDHHC11BP0C7U3 371 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 SGSHP51688 502 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 TSPY1Q01534 308 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 FXNQ16595 210 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 VPS26BQ4G0F5 336 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 ERMP1Q7Z2K6 904 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms