RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 POU6F1Q14863 301 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ZNF423Q2M1K9 1284 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ZNF542PQ5EBM4 170 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CERCAMQ5T4B2 595 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ANKRD22Q5VYY1 191 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CPT1BQ92523 772 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 RUNDC3BQ96NL0 473 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 WDR26Q9H7D7 661 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TMEM9BQ9NQ34 198 aa17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTCHD3P3-201ENST00000403073 C2orf81A6NN90 581 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 STX7O15400 261 aaKnown RBP17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TTI1O43156 1089 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 LDB2O43679 373 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CRTAMO95727 393 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CER1O95813 267 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TPSB2P20231 275 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 LPOP22079 712 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 IL9RQ01113 521 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 KCNJ11Q14654 390 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 NFATC4Q14934 902 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 SHBQ15464 509 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TPSAB1Q15661 275 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 STPG1Q5TH74 334 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 HEATR4Q86WZ0 1026 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 JAMLQ86YT9 394 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 OR4K2Q8NGD2 314 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ELF4Q99607 663 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TEX101Q9BY14 249 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ERVMER34-1Q9H9K5 563 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 RAD18Q9NS91 495 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 PNMA8BQ9ULN7 279 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 PKP3Q9Y446 797 aa17.11■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TMEM202A6NGA9 273 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 FADS2P1A8MWK0 482 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CACNB4O00305 520 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 INPP4BO15327 924 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TEAD1P28347 426 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 MAGEA6P43360 314 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 SESN2P58004 480 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TMPRSS15P98073 1019 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CDK3Q00526 305 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 EIF2B5Q13144 721 aaKnown RBP17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 SEPT6Q14141 434 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 UAP1L1Q3KQV9 507 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CCDC38Q502W7 563 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ENPP7Q6UWV6 458 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ADAMTSL4Q6UY14 1074 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 OR13C4Q8NGS5 318 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 SPATA16Q9BXB7 569 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 IL26Q9NPH9 171 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 DNAAF2Q9NVR5 837 aaKnown RBP17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 DNAJC28Q9NX36 388 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 KLF15Q9UIH9 416 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CNOT6Q9ULM6 557 aaKnown RBP17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 OTOGLQ3ZCN5 2332 aa17.1■□□□□ 0.33
PTCHD3P3-201ENST00000403073 A0A1B0GTQ1 180 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CCDC78A2IDD5 438 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TMEM63AO94886 807 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 HOXC4P09017 264 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 HTR1BP28222 390 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 KIAA1024LP59773 190 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 DCDC1P59894 354 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CDK16Q00536 496 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CKAP4Q07065 602 aaKnown RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 BNIP3Q12983 259 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 DHX34Q14147 1143 aaKnown RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 WHAMMP3Q1A5X7 153 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 KCTD16Q68DU8 428 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 MACC1Q6ZN28 852 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ZNF534Q76KX8 674 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TRIM74Q86UV6 250 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 PARGQ86W56 976 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TRAM1L1Q8N609 369 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TSACCQ96A04 125 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 HIC2Q96JB3 615 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 PLEKHG4BQ96PX9 1271 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 CDH19Q9H159 772 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 PHPT1Q9NRX4 125 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TM7SF3Q9NS93 570 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 NFKBIL1Q9UBC1 381 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 FKBPLQ9UIM3 349 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 TMEM98Q9Y2Y6 226 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 MRFAP1Q9Y605 127 aa17.09■□□□□ 0.33
PTCHD3P3-201ENST00000403073 MROH6A6NGR9 719 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 GOLGA8MH3BSY2 632 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 CCL22O00626 93 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SCAMP1O15126 338 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 DFNA5O60443 496 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 SDC3O75056 442 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 AVILO75366 819 aa17.08■□□□□ 0.32
PTCHD3P3-201ENST00000403073 PYGLP06737 847 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms