RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ELOVL2Q9NXB9 296 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 TMEM216Q9P0N5 145 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 POU2F1P14859 743 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 NR4A1P22736 598 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 ZNF730Q6ZMV8 503 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 RASSF6Q6ZTQ3 369 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 ANKRD46Q86W74 232 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 SNX15Q9NRS6 342 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 CLDND1Q9NY35 253 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 PRKCHP24723 683 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 CRYBB1P53674 252 aaPredicted RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 CLEC6AQ6EIG7 209 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 SATL1Q86VE3 508 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 PACS2Q86VP3 889 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 KATNAL2Q8IYT4 538 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 OR10H5Q8NGA6 315 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 RHPN2P1A8MT19 583 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 STX16-NPEPL1H3BU86 382 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 STX16O14662 325 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 RLN1P04808 185 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 LGALS3BPQ08380 585 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 ARL14EPQ8N8R7 260 aaPredicted RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 SHC3Q92529 594 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 APOLD1Q96LR9 279 aa13.74□□□□□ -0.21
VAPA-202ENST00000400000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
VAPA-202ENST00000400000 WBP11Q9Y2W2 641 aaKnown RBP13.74□□□□□ -0.21
VAPA-202ENST00000400000 ETS2P15036 469 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 TTMPQ5BVD1 217 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 SLC34A3Q8N130 599 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ANKRD52Q8NB46 1076 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 KIAA1522Q9P206 1035 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 ZNF214Q9UL59 606 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 TMCC2O75069 709 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 TNFAIP8O95379 198 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 SERPINA1P01009 418 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 MYL9P24844 172 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 GLUD2P49448 558 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 OAZ1P54368 228 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 MZT2AQ6P582 158 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 UBR7Q8N806 425 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 KPNA4O00629 521 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 CHADO15335 359 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ECDO95905 644 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 AHCYP23526 432 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 C2orf80Q0P641 193 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ZBTB6Q15916 424 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 POC5Q8NA72 575 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 CHMP1AQ9HD42 196 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 OAS3Q9Y6K5 1087 aaKnown RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 LRRC72A6NJI9 287 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 OR1F1O43749 312 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 MPSTP25325 297 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 PUDPQ08623 228 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ATXN7L2Q5T6C5 722 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 BEND5Q7L4P6 421 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ESAMQ96AP7 390 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 CPED1A4D0V7 1026 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 GJA1P17302 382 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 PSME3P61289 254 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 DSC2Q02487 901 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 SQLEQ14534 574 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 HSDL1Q3SXM5 330 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 PYROXD2Q8N2H3 581 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 TMEM161BQ8NDZ6 487 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 METTL21AQ8WXB1 218 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 WDR55Q9H6Y2 383 aaPredicted RBP13.73□□□□□ -0.21
VAPA-202ENST00000400000 ADGRE2Q9UHX3 823 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 PTPRMP28827 1452 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 MEIS2O14770 477 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 MAGEB3O15480 346 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 KRT36O76013 467 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 STARP49675 285 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 LDLRAP1Q5SW96 308 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 CAVIN3Q969G5 261 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 PCDHGC4Q9Y5F7 938 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 DGKBQ9Y6T7 804 aa13.73□□□□□ -0.21
VAPA-202ENST00000400000 PSMD10O75832 226 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 TRBC1P01850 177 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 ITGA2BP08514 1039 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 KCNA5P22460 613 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 PAX7P23759 505 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 ALDH4A1P30038 563 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 DHPSP49366 369 aaPredicted RBP13.72□□□□□ -0.21
VAPA-202ENST00000400000 PRKCZQ05513 592 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 ATAT1Q5SQI0 421 aa13.72□□□□□ -0.21
VAPA-202ENST00000400000 INTS11Q5TA45 600 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms