RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 HEXDCQ8WVB3 486 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 ZHX1-C8orf76Q96EF9 292 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 SLC39A3Q9BRY0 314 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 STARD7Q9NQZ5 370 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 EHD3Q9NZN3 535 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 LNPEPQ9UIQ6 1025 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 BTBD3Q9Y2F9 522 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 IPPQ9Y573 584 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 YJEFN3A6XGL0 299 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TAF4O00268 1085 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 EDN1P05305 212 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 GHRHRQ02643 423 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 BNIP2Q12982 314 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 CNPY1Q3B7I2 92 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 LBX2Q6XYB7 198 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TMEM130Q8N3G9 435 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 C10orf53Q8N6V4 93 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 OR2T12Q8NG77 320 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PNPT1Q8TCS8 783 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 GRIN3AQ8TCU5 1115 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 SLCO2A1Q92959 643 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 FBXL18Q96ME1 805 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 HDHD2Q9H0R4 259 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PLK2Q9NYY3 685 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 SOWAHBA6NEL2 793 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 URODP06132 367 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 IDO1P14902 403 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PTPN3P26045 913 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 KRT20P35900 424 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 KPNA1P52294 538 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 CDH15P55291 814 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 DLG1Q12959 904 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 KRR1Q13601 381 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 ATG14Q6ZNE5 492 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 OR2T34Q8NGX1 318 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 OR2T3Q8NH03 318 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 DQX1Q8TE96 717 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 DDX1Q92499 740 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TPK1Q9H3S4 243 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 DNAJC28Q9NX36 388 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 ADGRE2Q9UHX3 823 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 IQCF5A8MTL0 148 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TMEM233B4DJY2 109 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 DNAJA2O60884 412 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 AKR1A1P14550 325 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 DGKAP23743 735 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 FEN1P39748 380 aaKnown RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ASPAP45381 313 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PFKPQ01813 784 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 POU5F1Q01860 360 aaKnown RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PPP1R8Q12972 351 aaKnown RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 GRIK3Q13003 919 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PHKG1Q16816 387 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 FAM151BQ6UXP7 276 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 FRMD7Q6ZUT3 714 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 CPSF7Q8N684 471 aaKnown RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PANX1Q96RD7 426 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 CXorf21Q9HAI6 301 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PRDM16Q9HAZ2 1276 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 FAM105AQ9NUU6 356 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TLR5O60602 858 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TNFRSF21O75509 655 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 FTH1P02794 183 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 HOXC6P09630 235 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 OR56A5P0C7T3 313 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 LPOP22079 712 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 SEPHS1P49903 392 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 SOWAHAQ2M3V2 549 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ALFQ53S48 1182 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 INO80DQ53TQ3 878 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ZNF57Q68EA5 555 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 GPR180Q86V85 440 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 CYP4Z1Q86W10 505 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ZC3H7AQ8IWR0 971 aaKnown RBP10.74□□□□□ -0.69
CCDC40-204ENST00000397545 PHACTR4Q8IZ21 702 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 GALNT15Q8N3T1 639 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TWIST2Q8WVJ9 160 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 GTF2A1LQ9UNN4 478 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 SATB2Q9UPW6 733 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 KLHL20Q9Y2M5 609 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 NPEPPSL1A6NEC2 478 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 H3BMM5 538 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TP73O15350 636 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 CDH3P22223 829 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ALDH4A1P30038 563 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 MC4RP32245 332 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 ICAM3P32942 547 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TTPAP49638 278 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 EPHB3P54753 998 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 LIPEQ05469 1076 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 TMEM63BQ5T3F8 832 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 SYPL2Q5VXT5 272 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 EGFLAMQ63HQ2 1017 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 SLC9A4Q6AI14 798 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 LUZP2Q86TE4 346 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 EPHX4Q8IUS5 362 aa10.74□□□□□ -0.69
CCDC40-204ENST00000397545 CENPIQ92674 756 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms