RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PIP4P1Q86T03 277 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 TTC30BQ8N4P2 665 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 DEFB124Q8NES8 71 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 WDR92Q96MX6 357 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 AGAP2Q99490 1192 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 LGR4Q9BXB1 951 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 FAM83DQ9H4H8 585 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 ETNK1Q9HBU6 452 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 PHPT1Q9NRX4 125 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 PNMA8BQ9ULN7 279 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 GOLGA6L10A0A0M3HER8 536 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 H3BM21 787 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 PSMD3O43242 534 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 MYCLP1P12525 358 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 JUNDP17535 347 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 KCNA4P22459 653 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 RPL22P35268 128 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 CDK3Q00526 305 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 HENMT1Q5T8I9 393 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 ALS2CLQ60I27 953 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 TTC27Q6P3X3 843 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 RBFAQ8N0V3 343 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 ATL2Q8NHH9 583 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 CAMK1GQ96NX5 476 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 TEX101Q9BY14 249 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 RAB6BQ9NRW1 208 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 KLQ9UEF7 1012 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 KLF15Q9UIH9 416 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 BTBD3Q9Y2F9 522 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 SCN8AQ9UQD0 1980 aa21.11■□□□□ 0.97
TSPAN4-206ENST00000397408 E7EVH7 732 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 PIAS2O75928 621 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 HOXC4P09017 264 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 CSRP1P21291 193 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 KELP23276 732 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 HMGCLP35914 325 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 GRK6P43250 576 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 NOVA1P51513 510 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 DCDC1P59894 354 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 HNRNPKP61978 463 aaKnown RBP eCLIP21.1■□□□□ 0.978e-6■■■■□ 19.7
TSPAN4-206ENST00000397408 PPARDQ03181 441 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 CYP1B1Q16678 543 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 ALG11Q2TAA5 492 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 INAVAQ3KP66 663 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 DENND5AQ6IQ26 1287 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 ADAMTSL4Q6UY14 1074 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 DBX2Q6ZNG2 339 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 NYAP1Q6ZVC0 841 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 NLRP8Q86W28 1048 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 PHACTR4Q8IZ21 702 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 GPR26Q8NDV2 337 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 CAPZA3Q96KX2 299 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 TCEAL2Q9H3H9 227 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 SLC32A1Q9H598 525 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 BPIFA1Q9NP55 256 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 RAD18Q9NS91 495 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 UCKL1Q9NWZ5 548 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 APOBEC3BQ9UH17 382 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 SAR1BQ9Y6B6 198 aa21.1■□□□□ 0.97
TSPAN4-206ENST00000397408 SPTBN2O15020 2390 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 TMEM202A6NGA9 273 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 PDE2AO00408 941 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 PHF2O75151 1096 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 PYGLP06737 847 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 BPIP17213 487 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 DGKAP23743 735 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 LMAN1P49257 510 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 SEMA5AQ13591 1074 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 KCTD19Q17RG1 926 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 KCTD16Q68DU8 428 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 KANSL1Q7Z3B3 1105 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 ZNF548Q8NEK5 533 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 OR56A4Q8NGH8 313 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 TSACCQ96A04 125 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 PDXPQ96GD0 296 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 CDH19Q9H159 772 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 ARNT2Q9HBZ2 717 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 FGF22Q9HCT0 170 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 NFKBIL1Q9UBC1 381 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 FEZ2Q9UHY8 353 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 PCOLCE2Q9UKZ9 415 aa21.09■□□□□ 0.97
TSPAN4-206ENST00000397408 ERI2A8K979 691 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 INPP4BO15327 924 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 BUD23O43709 281 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 COILP38432 576 aaPredicted RBP21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 SRP54P61011 504 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 PSAPL1Q6NUJ1 521 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 CCDC137Q6PK04 289 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 RD3Q7Z3Z2 195 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 TRIM74Q86UV6 250 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 HID1Q8IV36 788 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 RHBDD1Q8TEB9 315 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 BTN2A2Q8WVV5 523 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 OR1E3Q8WZA6 343 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 SPATA16Q9BXB7 569 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 SLC13A1Q9BZW2 595 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 PIH1D1Q9NWS0 290 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 IL17CQ9P0M4 197 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 ARL5AQ9Y689 179 aa21.08■□□□□ 0.97
TSPAN4-206ENST00000397408 LRP4O75096 1905 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms