RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 EDDM13A0A1B0GTR0 161 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 FAM237BA0A1B0GVD1 139 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 HEATR9A2RTY3 570 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 PGLSO95336 258 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 IVLP07476 585 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 GNSP15586 552 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 ADRA1DP25100 572 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 CD6P30203 668 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 RPL26P61254 145 aaKnown RBP13.26□□□□□ -0.29
SEC13-209ENST00000397117 GRIK2Q13002 908 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 ZNF234Q14588 700 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 STAT4Q14765 748 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 SPANXN3Q5MJ09 141 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 CHST14Q8NCH0 376 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 GRIN3AQ8TCU5 1115 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 FBF1Q8TES7 1133 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 ZNF641Q96N77 438 aaPredicted RBP13.26□□□□□ -0.29
SEC13-209ENST00000397117 SUV39H2Q9H5I1 410 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 CCDC86Q9H6F5 360 aaKnown RBP13.26□□□□□ -0.29
SEC13-209ENST00000397117 ITM2CQ9NQX7 267 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 CHRAC1Q9NRG0 131 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 THAP10Q9P2Z0 257 aaPredicted RBP13.26□□□□□ -0.29
SEC13-209ENST00000397117 PCOLCE2Q9UKZ9 415 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 SOX13Q9UN79 622 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
SEC13-209ENST00000397117 APOBEC2Q9Y235 224 aaKnown RBP13.26□□□□□ -0.29
SEC13-209ENST00000397117 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
SEC13-209ENST00000397117 A0A1B0GTW7 788 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 EXOC1LA0A1B0GW35 172 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 ANKRD66B4E2M5 251 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 NPC1O15118 1278 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 HTRA2O43464 458 aaPredicted RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 USP1O94782 785 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 PRLP01236 227 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 SHBGP04278 402 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 PDHA1P08559 390 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 GRIA4P48058 902 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 CRYMQ14894 314 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 COL28A1Q2UY09 1125 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 HNRNPA1L2Q32P51 320 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 STEAP4Q687X5 459 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 KIAA1324Q6UXG2 1013 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 NLRP9Q7RTR0 991 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 ZNF366Q8N895 744 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 ZBTB9Q96C00 473 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 TOE1Q96GM8 510 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 RANBP9Q96S59 729 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 CYTH2Q99418 400 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 TRIM56Q9BRZ2 755 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 KIFC1Q9BW19 673 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 MRM3Q9HC36 420 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 PPANQ9NQ55 473 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 USP36Q9P275 1121 aaKnown RBP13.25□□□□□ -0.29
SEC13-209ENST00000397117 SUN2Q9UH99 717 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 IL36AQ9UHA7 158 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 TCAF1Q9Y4C2 921 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 NFS1Q9Y697 457 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 STON1Q9Y6Q2 735 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 KNTC1P50748 2209 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 NUMA1Q14980 2115 aa13.25□□□□□ -0.29
SEC13-209ENST00000397117 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 TCRBV9S1A1TA0A576 114 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 OPA1O60313 960 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 FZD6O60353 706 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 CRTAMO95727 393 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 UGT2B4P06133 528 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ZNF883P0CG24 379 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 HLA-EP13747 358 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 PAMP19021 973 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 BNC1Q01954 994 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ENPP2Q13822 863 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 QPCTQ16769 361 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 KLHL38Q2WGJ6 581 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 GLIPR1L2Q4G1C9 344 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ANKRD20A4Q4UJ75 823 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 CES3Q6UWW8 571 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 GDPD4Q6W3E5 623 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 DBX2Q6ZNG2 339 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 CROCCP2Q86T23 111 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 TMEM135Q86UB9 458 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
SEC13-209ENST00000397117 CADM4Q8NFZ8 388 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 BRSK1Q8TDC3 778 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 PTPRN2Q92932 1015 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 OSBPL1AQ9BXW6 950 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.24□□□□□ -0.294e-32■■■■□ 25.9
SEC13-209ENST00000397117 CCDC78A2IDD5 438 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 SMIM23A6NLE4 172 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms