RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CBX5P45973 191 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ARFIP1P53367 373 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 HYAL2Q12891 473 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ATP13A5Q4VNC0 1218 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 KBTBD7Q8WVZ9 684 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 KAT2AQ92830 837 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 PPP3R2Q96LZ3 170 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 DCUN1D5Q9BTE7 237 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 AGO3Q9H9G7 860 aaKnown RBP17.41■□□□□ 0.38
MCF2L-208ENST00000397030 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 TAS2R14Q9NYV8 317 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 RFXANKO14593 260 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 PLSCR1O15162 318 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 RGS20O76081 388 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 PBX3P40426 434 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 CAPZA1P52907 286 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 PYDC2Q56P42 97 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 OR5M3Q8NGP4 307 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 FATE1Q969F0 183 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 SHDQ96IW2 340 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ADAM7Q9H2U9 754 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 MFN2O95140 757 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 TOP3AQ13472 1001 aaPredicted RBP17.41■□□□□ 0.38
MCF2L-208ENST00000397030 HIST1H2AAQ96QV6 131 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 IFNGP01579 166 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 GNALP38405 381 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 PPP2R2BQ00005 443 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 EEF1DP3Q658K8 133 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ZNF730Q6ZMV8 503 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 POLNQ7Z5Q5 900 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 HOMEZQ8IX15 550 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ZBTB2Q8N680 514 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 OR52E6Q96RD3 313 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 NR2E1Q9Y466 385 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 MAP4K5Q9Y4K4 846 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ARF4P18085 180 aaPredicted RBP17.41■□□□□ 0.38
MCF2L-208ENST00000397030 PPP3CAQ08209 521 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ARMC3Q5W041 872 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 TERB1Q8NA31 727 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 SPPL2BQ8TCT7 592 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 AK5Q9Y6K8 562 aa17.41■□□□□ 0.38
MCF2L-208ENST00000397030 ASTN2O75129 1339 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 HYKKA2RU49 373 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 C9J4A7 227 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 UGT2B17O75795 530 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 NRIP1P48552 1158 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ACAP1Q15027 740 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ULK3Q6PHR2 472 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 LPCAT2Q7L5N7 544 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 AMIGO1Q86WK6 493 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ZNF490Q9ULM2 529 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 PCDHGC5Q9Y5F6 944 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ARL5CA6NH57 179 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 SSNA1O43805 119 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 RAB10P61026 200 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 USP46P62068 366 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 MSLNQ13421 630 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 FKBP1CQ5VVH2 108 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 OR5B17Q8NGF7 314 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 RBM18Q96H35 190 aaKnown RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 VCPIP1Q96JH7 1222 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 KLHL32Q96NJ5 620 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 PIK3C2BO00750 1634 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 TAF4O00268 1085 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ATP9AO75110 1047 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ITIH4Q14624 930 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 DUSP28Q4G0W2 176 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 GHDCQ8N2G8 530 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 CERS2Q96G23 380 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 CD248Q9HCU0 757 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ABCB8Q9NUT2 735 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 RGS17Q9UGC6 210 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 PACSIN3Q9UKS6 424 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 CLDN11O75508 207 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 BCL10O95999 233 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 TACR2P21452 398 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ANXA8L1Q5VT79 327 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 LMX1AQ8TE12 382 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 XAGE5Q8WWM1 108 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 ITCHQ96J02 903 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 HSFY1Q96LI6 401 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 USP2O75604 605 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-208ENST00000397030 HNRNPLP14866 589 aaKnown RBP eCLIP17.4■□□□□ 0.385e-9■■■■■ 27.5
MCF2L-208ENST00000397030 GALK1P51570 392 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 NAB1Q13506 487 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 OTOP3Q7RTS5 596 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 FAM84AQ96KN4 292 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
MCF2L-208ENST00000397030 E9PAM4 449 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 MED26O95402 600 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 MT-CYBP00156 380 aaPredicted RBP17.39■□□□□ 0.38
MCF2L-208ENST00000397030 TRBC1P01850 177 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 FAM58BPP0C7Q3 252 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 PTENP60484 403 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms