RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CYLC2Q14093 348 aaPredicted RBP16.1■□□□□ 0.17
SNX6-202ENST00000396526 ZNF549Q6P9A3 640 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 C16orf89Q6UX73 402 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 FRMD7Q6ZUT3 714 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 GAREM2Q75VX8 874 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 LPGAT1Q92604 370 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 ATP13A3Q9H7F0 1226 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 POLR3BQ9NW08 1133 aaPredicted RBP16.1■□□□□ 0.17
SNX6-202ENST00000396526 BCAP29Q9UHQ4 241 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 ANGPTL2Q9UKU9 493 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 TMCO1Q9UM00 188 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 C15orf41Q9Y2V0 281 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 CHRM3P20309 590 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 PSMA3P25788 255 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 PTGER3P43115 390 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 CCR10P46092 362 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 CLCN4P51793 760 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 HERVK_113P63132 956 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 SLC25A3Q00325 362 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 NFKB2Q00653 900 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 TPGS1Q6ZTW0 290 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 KLHL23Q8NBE8 558 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 L3HYPDHQ96EM0 354 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 ERVK-6Q9BXR3 956 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 DERL2Q9GZP9 239 aa16.1■□□□□ 0.17
SNX6-202ENST00000396526 A0A1W2PRU2 124 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 ESR1P03372 595 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 PIK3R1P27986 724 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 CACNG1Q06432 222 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 KHDC1Q4VXA5 237 aaKnown RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 PHTF2Q8N3S3 785 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 PTGR2Q8N8N7 351 aaPredicted RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 FIBINQ8TAL6 211 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 MOCOSQ96EN8 888 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 LENG8Q96PV6 779 aaPredicted RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 APPL1Q9UKG1 709 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 ZNF711Q9Y462 761 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 TRAF6Q9Y4K3 522 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 OR51B4Q9Y5P0 310 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 H7C0S8 307 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SERPINA4P29622 427 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 CSNK1DP48730 415 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SNRPD1P62314 119 aaKnown RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 AP2B1P63010 937 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 ART3Q13508 389 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SEMA3AQ14563 771 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 ATXN7L2Q5T6C5 722 aaPredicted RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 PNPLA1Q8N8W4 532 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 KIAA1191Q96A73 305 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 BPIFA1Q9NP55 256 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 PCDHB1Q9Y5F3 818 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SUPT3HB4E1H0 165 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SOCS5O75159 536 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SUPT3HO75486 399 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 SKAP2O75563 359 aaPredicted RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 CRCPO75575 148 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 PGLSO95336 258 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 PSMG1O95456 288 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 DDX6P26196 483 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNX6-202ENST00000396526 HMGCLP35914 325 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 IL2P60568 153 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 RCN1Q15293 331 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 BBS7Q8IWZ6 715 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 HS6ST3Q8IZP7 471 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 CLYBLQ8N0X4 340 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
SNX6-202ENST00000396526 KYQ8NBH2 561 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 MICAL1Q8TDZ2 1067 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 ARMC5Q96C12 935 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 EFCAB1Q9HAE3 211 aa16.09■□□□□ 0.17
SNX6-202ENST00000396526 MEI4A8MW99 385 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 CD160O95971 181 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 ZNF7P17097 686 aaPredicted RBP16.08■□□□□ 0.17
SNX6-202ENST00000396526 HERC3Q15034 1050 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 ZNF678Q5SXM1 525 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 LILRA6Q6PI73 481 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 PAQR3Q6TCH7 311 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 RTL10Q7L3V2 364 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 DEFB107AQ8IZN7 70 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 FBXO39Q8N4B4 442 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 GIMAP7Q8NHV1 300 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 ACTRT2Q8TDY3 377 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 ADAMTS19Q8TE59 1207 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 FAM136AQ96C01 138 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 CATSPER2Q96P56 530 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 TCF25Q9BQ70 676 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 WBP1LQ9NX94 342 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 PLK2Q9NYY3 685 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 EVLQ9UI08 416 aaPredicted RBP16.08■□□□□ 0.17
SNX6-202ENST00000396526 PLA2G4CQ9UP65 541 aa16.08■□□□□ 0.17
SNX6-202ENST00000396526 KERAO60938 352 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 FKBP6O75344 327 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 WISP3O95389 354 aaPredicted RBP16.08■□□□□ 0.16
SNX6-202ENST00000396526 ITGALP20701 1170 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 CD9P21926 228 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 STX1BP61266 288 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 PFKFB4Q16877 469 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 ANKS6Q68DC2 871 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 TMEM207Q6UWW9 146 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms