RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SPATA5L1Q9BVQ7 753 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CHRAC1Q9NRG0 131 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TRAF6Q9Y4K3 522 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 A0A0U1RQJ8 604 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 FAM170AA1A519 330 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 GSTA4O15217 222 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PI15O43692 258 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TBL1XO60907 577 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ZSCAN5DPP0CG00 497 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SLC39A5Q6ZMH5 540 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TMEM126BQ8IUX1 230 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 FNDC5Q8NAU1 212 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 KDM1BQ8NB78 822 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NXPE3Q969Y0 559 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 VPS50Q96JG6 964 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MIPEPQ99797 713 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TFB2MQ9H5Q4 396 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 INTS7Q9NVH2 962 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 GPATCH2LQ9NWQ4 482 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 COL6A6A6NMZ7 2263 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PSMD11O00231 422 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PSMD12O00232 456 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 USP12O75317 370 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CASP2P42575 452 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RANBP1P43487 201 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NUDT2P50583 147 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 STC1P52823 247 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CNTN1Q12860 1018 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 DLG1Q12959 904 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MOGSQ13724 837 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TCEA2Q15560 299 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PHKG1Q16816 387 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RAD51AP1Q96B01 352 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MYO19Q96H55 970 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 HGH1Q9BTY7 390 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TTLL2Q9BWV7 592 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 LRMDAQ9H2I8 198 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF556Q9HAH1 456 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 USP29Q9HBJ7 922 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 IL23AQ9NPF7 189 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CASS4Q9NQ75 786 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 C6orf203Q9P0P8 240 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 XPR1Q9UBH6 696 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 WBP11Q9Y2W2 641 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SCN3AQ9NY46 2000 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PRAMEF11O60813 436 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 KCNA4P22459 653 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 HNF4AP41235 474 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TSTA3Q13630 321 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SULT1C3Q6IMI6 304 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MILR1Q7Z6M3 343 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SYTL1Q8IYJ3 562 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PAWRQ96IZ0 340 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 KCTD15Q96SI1 283 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 OMDQ99983 421 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 EFCAB11Q9BUY7 163 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 DYRK1BQ9Y463 629 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 HS3ST4Q9Y661 456 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TMEM63AO94886 807 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SLC25A14O95258 325 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SNRPB2P08579 225 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 IRF1P10914 325 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CD9P21926 228 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SLC11A1P49279 550 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 GPR15P49685 360 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ALDH18A1P54886 795 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ACSM2AQ08AH3 577 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MTM1Q13496 603 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CYP2A13Q16696 494 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RFX4Q33E94 735 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MS4A13Q5J8X5 152 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ACSM2BQ68CK6 577 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 AAGABQ6PD74 315 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 GPRIN3Q6ZVF9 776 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CILP2Q8IUL8 1156 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 OR4K2Q8NGD2 314 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NDEL1Q9GZM8 345 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RUBCNLQ9H714 662 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SLC27A5Q9Y2P5 690 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TCRBV7S2A1N4TA0A589 114 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CAPRIN1Q14444 709 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 UBXN11Q5T124 520 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ZC3HC1Q86WB0 502 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CAMK1DQ8IU85 385 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 KRT78Q8N1N4 520 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CBARPQ8N350 705 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC138Q96M89 665 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 DPEP3Q9H4B8 488 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RNPEPL1Q9HAU8 725 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 THUMPD1Q9NXG2 353 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NCOR2Q9Y618 2525 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 GLYATL1P3A0A0U1RQE8 302 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 H3BM21 787 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 AP2A2O94973 939 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NQO1P15559 274 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NUDT1P36639 197 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SERPINB10P48595 397 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RPIAP49247 311 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SESN3P58005 492 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PFKFB4Q16877 469 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms