RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SMAD3P84022 425 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 ECT2LQ008S8 904 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DGCR6Q14129 220 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 POU6F1Q14863 301 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 FASTKD3Q14CZ7 662 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 TGFBIQ15582 683 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 N4BP2L1Q5TBK1 243 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 C16orf46Q6P387 395 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 Q6ZNX1 250 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CYP2U1Q7Z449 544 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ADGRG6Q86SQ4 1221 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TMEM130Q8N3G9 435 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 NETO2Q8NC67 525 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 OR52K1Q8NGK4 314 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC35B2Q8TB61 432 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 MAGEE2Q8TD90 523 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 KBTBD7Q8WVZ9 684 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 RASSF5Q8WWW0 418 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLCO2A1Q92959 643 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 B3GALT6Q96L58 329 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 C8orf48Q96LL4 319 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TXLNGYQ9BZA5 131 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 POLR1EQ9GZS1 481 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 TASP1Q9H6P5 420 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TLE6Q9H808 572 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 NOL11Q9H8H0 719 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 PNPLA8Q9NP80 782 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PIH1D1Q9NWS0 290 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 COMMD8Q9NX08 183 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SLC25A13Q9UJS0 675 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 E9PAM4 449 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 M0QX08 132 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 MFSD11O43934 449 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 GCATO75600 419 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ENDOD1O94919 500 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 GLUD1P00367 558 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 GALTP07902 379 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ZNF182P17025 639 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 VARSP26640 1264 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 PPP3CCP48454 512 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ARHGDIAP52565 204 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 NSUN2Q08J23 767 aaKnown RBP eCLIP5.69□□□□□ -1.5
RFFL-202ENST00000394597 GPR17Q13304 367 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 DPYSQ14117 519 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ARHGEF7Q14155 803 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TRIP4Q15650 581 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 TEX44Q53QW1 395 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ARMCX4Q5H9R4 360 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SPANXN2Q5MJ10 180 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 GRTP1Q5TC63 336 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 TPGS2Q68CL5 300 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SDE2Q6IQ49 451 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CGB2Q6NT52 195 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 ALKAL1Q6UXT8 129 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 CCDC28AQ8IWP9 274 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 UBR7Q8N806 425 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 SNX31Q8N9S9 440 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PDPRQ8NCN5 879 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 HM13Q8TCT9 377 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 EFHD2Q96C19 240 aaPredicted RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 RCN3Q96D15 328 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 PTCD3Q96EY7 689 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 QKIQ96PU8 341 aaKnown RBP eCLIP5.69□□□□□ -1.53e-7■■■□□ 18.5
RFFL-202ENST00000394597 PAAF1Q9BRP4 392 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 IL22Q9GZX6 179 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 EPS8L2Q9H6S3 715 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 COQ10BQ9H8M1 238 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 AFF4Q9UHB7 1163 aaKnown RBP5.69□□□□□ -1.5
RFFL-202ENST00000394597 VPS9D1Q9Y2B5 631 aa5.69□□□□□ -1.5
RFFL-202ENST00000394597 KCNU1A8MYU2 1149 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 FAM189A1O60320 539 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 LYPLA1O75608 230 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 CRYZL1O95825 349 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 RHOQP17081 205 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 GABRR2P28476 465 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 GP5P40197 560 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 NAB1Q13506 487 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 KCNJ8Q15842 424 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 AASDHQ4L235 1098 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 ZRANB3Q5FWF4 1079 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 HABP4Q5JVS0 413 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 HFE2Q6ZVN8 426 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 SLC15A3Q8IY34 581 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TDRD5Q8NAT2 981 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 MINDY2Q8NBR6 621 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 LRRC20Q8TCA0 184 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 CPT1BQ92523 772 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 NPY6RQ99463 290 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 EBNA1BP2Q99848 306 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 WDR6Q9NNW5 1121 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 NDFIP2Q9NV92 336 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 HEMK1Q9Y5R4 338 aaPredicted RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 MAP1BP46821 2468 aaKnown RBP5.68□□□□□ -1.5
RFFL-202ENST00000394597 RGSL1A5PLK6 1076 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 VILLO15195 856 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 DNAJA2O60884 412 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 SOAT2O75908 522 aa5.68□□□□□ -1.5
RFFL-202ENST00000394597 TPSB2P20231 275 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms