RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 STC1P52823 247 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TSNQ15631 228 aaKnown RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 KLHDC10Q6PID8 442 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 HJURPQ8NCD3 748 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 PYDC1Q8WXC3 89 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TCEAL4Q96EI5 215 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 GCNAQ96QF7 691 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 RANBP9Q96S59 729 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 CCDC167Q9P0B6 97 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 RNF112Q9ULX5 631 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 C1orf232A0A0U1RR37 186 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 CDC7O00311 574 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 PER2O15055 1255 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 H2AFYO75367 372 aaKnown RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TPBGLP0DKB5 382 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 AOC1P19801 751 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 CTSOP43234 321 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 PKNOX1P55347 436 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 ERVFC1P60507 584 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 ACAP2Q15057 778 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TAF11Q15544 211 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 OR4D1Q15615 310 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 PIWIL4Q7Z3Z4 852 aaKnown RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 OR6Y1Q8NGX8 325 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 ZNF689Q96CS4 500 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TRIB3Q96RU7 358 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 ABCB8Q9NUT2 735 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
TCOF1-203ENST00000394269 TRIM16O95361 564 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 PIK3R1P27986 724 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 NTHL1P78549 312 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ECT2LQ008S8 904 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ART3Q13508 389 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 MUM1Q2TAK8 710 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 WASHC2DQ5SRD0 308 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ACBD5Q5T8D3 534 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ARMC12Q5T9G4 340 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 RETSATQ6NUM9 610 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 RNF168Q8IYW5 571 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 KDM1BQ8NB78 822 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 GIMAP7Q8NHV1 300 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ADAMTS19Q8TE59 1207 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 KCNA7Q96RP8 456 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 SLC30A3Q99726 388 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 SIKE1Q9BRV8 207 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 C2orf49Q9BVC5 232 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 SLC46A2Q9BY10 475 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 DCLRE1BQ9H816 532 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 FBRSL1Q9HCM7 1045 aaKnown RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 PRM3Q9NNZ6 103 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 LCHNA4D1U4 455 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TRIM24O15164 1050 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 CLDN7O95471 211 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TBL3Q12788 808 aaKnown RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TAF1AQ15573 450 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 MMEL1Q495T6 779 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ING5Q8WYH8 240 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 UBXN10Q96LJ8 280 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 NPAS2Q99743 824 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 BTRCQ9Y297 605 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 NPEPPSL1A6NEC2 478 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TBX10O75333 385 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TM7SF2O76062 418 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 PRKAA2P54646 552 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 BCL2L1Q07817 233 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 MTA1Q13330 715 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 RAB44Q7Z6P3 723 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 CPNE9Q8IYJ1 553 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 SKA2Q8WVK7 121 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 RCN3Q96D15 328 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 PANX3Q96QZ0 392 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 EML4Q9HC35 981 aaKnown RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ASAH2Q9NR71 780 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 NLE1Q9NVX2 485 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-203ENST00000394269 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 C15orf41Q9Y2V0 281 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TRAF6Q9Y4K3 522 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 TIMM22Q9Y584 194 aa11.1□□□□□ -0.63
TCOF1-203ENST00000394269 PSMG1O95456 288 aa11.09□□□□□ -0.63
TCOF1-203ENST00000394269 GUCA1CO95843 209 aa11.09□□□□□ -0.63
TCOF1-203ENST00000394269 ZNF37AP17032 561 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-203ENST00000394269 CR2P20023 1033 aa11.09□□□□□ -0.63
TCOF1-203ENST00000394269 CTNNB1P35222 781 aa11.09□□□□□ -0.63
TCOF1-203ENST00000394269 SOX11P35716 441 aa11.09□□□□□ -0.63
TCOF1-203ENST00000394269 SULT2A1Q06520 285 aa11.09□□□□□ -0.63
TCOF1-203ENST00000394269 LMAN2Q12907 356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms