RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ATOH8Q96SQ7 321 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 CMTM6Q9NX76 183 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 SCN10AQ9Y5Y9 1956 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 DNAH12Q6ZR08 3092 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 DHRS12A0PJE2 317 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 H3BMM5 538 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 CD3EAPO15446 510 aaKnown RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 BMP10O95393 424 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 BNIP2Q12982 314 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 PFKFB4Q16877 469 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 SPPL2CQ8IUH8 684 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 ERI1Q8IV48 349 aaKnown RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 CBR4Q8N4T8 237 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 RHEBL1Q8TAI7 183 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.6
CBX1-202ENST00000393408 KCNA7Q96RP8 456 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 POPDC3Q9HBV1 291 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 SDR39U1Q9NRG7 319 aaPredicted RBP18.81■□□□□ 0.6
CBX1-202ENST00000393408 AGPAT4Q9NRZ5 378 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 AURKCQ9UQB9 309 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 SCML2Q9UQR0 700 aa18.81■□□□□ 0.6
CBX1-202ENST00000393408 ANKRD36A6QL64 1941 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 TYMPP19971 482 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 PAX3P23760 479 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 SLC6A2P23975 617 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 CD52P31358 61 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 INPP5AQ14642 412 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 PTPRCAPQ14761 206 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 GEN1Q17RS7 908 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 LPCAT2Q7L5N7 544 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 MON1AQ86VX9 555 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 ZNF354CQ86Y25 554 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 DDIASQ8IXT1 998 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 GOLM1Q8NBJ4 401 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 GAB3Q8WWW8 586 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 FEM1CQ96JP0 617 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.8■□□□□ 0.6
CBX1-202ENST00000393408 EGFL7Q9UHF1 273 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 PADI3Q9ULW8 664 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 ARL5AQ9Y689 179 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 IGLV3-10A0A075B6K4 115 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 CCDC162PA2VCL2 907 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 C9JVG2 144 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 GJB3O75712 270 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 LBPP18428 481 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 UGT1A6P19224 532 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 ETFBP38117 255 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 CDH15P55291 814 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 YBX1P67809 324 aaKnown RBP18.8■□□□□ 0.6
CBX1-202ENST00000393408 PLOD1Q02809 727 aaPredicted RBP18.8■□□□□ 0.6
CBX1-202ENST00000393408 CACNB2Q08289 660 aaPredicted RBP18.8■□□□□ 0.6
CBX1-202ENST00000393408 CAPRIN1Q14444 709 aaKnown RBP18.8■□□□□ 0.6
CBX1-202ENST00000393408 KCTD21Q4G0X4 260 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 SDHAF4Q5VUM1 108 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 MRNIPQ6NTE8 343 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 CAMK1DQ8IU85 385 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 PEX13Q92968 403 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 SLC45A3Q96JT2 553 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 UROC1Q96N76 676 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 TFB2MQ9H5Q4 396 aaKnown RBP18.8■□□□□ 0.6
CBX1-202ENST00000393408 SLC52A3Q9NQ40 469 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 SMOXQ9NWM0 555 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 ACTR3BQ9P1U1 418 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 POLG2Q9UHN1 485 aa18.8■□□□□ 0.6
CBX1-202ENST00000393408 TRIM64CA6NLI5 447 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 CHRM3P20309 590 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 YWHAHQ04917 246 aaPredicted RBP18.79■□□□□ 0.6
CBX1-202ENST00000393408 SLC39A12Q504Y0 691 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 IL31Q6EBC2 164 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 SERINC5Q86VE9 423 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 TRPC4APQ8TEL6 797 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 IGSF8Q969P0 613 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 TUBGCP3Q96CW5 907 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 LRRC58Q96CX6 371 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 CYP2S1Q96SQ9 504 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 MTG1Q9BT17 334 aaPredicted RBP18.79■□□□□ 0.6
CBX1-202ENST00000393408 GID8Q9NWU2 228 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 HGFP14210 728 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 IL10P22301 178 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 MYF6P23409 242 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 PSMA4P25789 261 aaKnown RBP18.79■□□□□ 0.6
CBX1-202ENST00000393408 IL10RBQ08334 325 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 COQ5Q5HYK3 327 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 ADGRG5Q8IZF4 528 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 BLOC1S5Q8TDH9 187 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 DIS3LQ8TF46 1054 aaKnown RBP18.79■□□□□ 0.6
CBX1-202ENST00000393408 SEMA3CQ99985 751 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 AARSD1Q9BTE6 412 aaKnown RBP18.79■□□□□ 0.6
CBX1-202ENST00000393408 PREBQ9HCU5 417 aa18.79■□□□□ 0.6
CBX1-202ENST00000393408 ABI2Q9NYB9 513 aaPredicted RBP18.79■□□□□ 0.6
CBX1-202ENST00000393408 CROCCQ5TZA2 2017 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 A0A0U1RQF3 1178 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 FAM149AA5PLN7 773 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 CLASP2O75122 1294 aaKnown RBP18.78■□□□□ 0.6
CBX1-202ENST00000393408 RPP40O75818 363 aaKnown RBP18.78■□□□□ 0.6
CBX1-202ENST00000393408 GNAO1P09471 354 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 LINC00032P0C843 101 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 FOXM1Q08050 763 aa18.78■□□□□ 0.6
CBX1-202ENST00000393408 DSC3Q14574 896 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms