RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 MAGEC3Q8TD91 643 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 SLC20A1Q8WUM9 679 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 FER1L6-AS2Q96M78 137 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 TUBGCP5Q96RT8 1024 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 MYOCQ99972 504 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 APOL2Q9BQE5 337 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 WWOXQ9NZC7 414 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ASXL3Q9C0F0 2248 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 MAPK13O15264 365 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 TXNL1O43396 289 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PRPSAP2O60256 369 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 DLX3O60479 287 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 TNFSF15O95150 251 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 DDAH2O95865 285 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 CES1P23141 567 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ITPKAP23677 461 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PBLDP30039 288 aaPredicted RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 BCL2L1Q07817 233 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 NME3Q13232 169 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 ATP13A4Q4VNC1 1196 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 AADACL4Q5VUY2 407 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PLEKHM3Q6ZWE6 761 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 RAB11FIP2Q7L804 512 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 STRADAQ7RTN6 431 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PLD3Q8IV08 490 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 LINC01599Q8WXQ3 324 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 TCEAL4Q96EI5 215 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PPP1R10Q96QC0 940 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 TMEM60Q9H2L4 133 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 GOLGA2P5Q9HBQ8 144 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 KLHL11Q9NVR0 708 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 POLR3BQ9NW08 1133 aaPredicted RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 AMACRQ9UHK6 382 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 LNPEPQ9UIQ6 1025 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 PADI4Q9UM07 663 aa8.11□□□□□ -1.11
LIMS1-203ENST00000393310 COPG1Q9Y678 874 aaKnown RBP8.11□□□□□ -1.11
LIMS1-203ENST00000393310 UBA6A0AVT1 1052 aaPredicted RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 OR6C65A6NJZ3 312 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CBX4O00257 560 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 TSPAN4O14817 238 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 NDUFS1P28331 727 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 POLD2P49005 469 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 RAD23BP54727 409 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 ACY1Q03154 408 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 C8orf74Q6P047 294 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 ZBTB46Q86UZ6 589 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CLVS1Q8IUQ0 354 aaPredicted RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 MMAAQ8IVH4 418 aaKnown RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CTAGE3PQ8IX95 158 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 RHOT1Q8IXI2 618 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 KDM1BQ8NB78 822 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 OLFML3Q9NRN5 406 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PSMD9O00233 223 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PDXKO00764 312 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 HOXC11O43248 304 aaPredicted RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 VAV1P15498 845 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PSMA2P25787 234 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 SLC6A4P31645 630 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 UGCGQ16739 394 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 AMZ1Q400G9 498 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 C14orf28Q4W4Y0 310 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 ADGRF1Q5T601 910 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 C20orf194Q5TEA3 1177 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PDPK2PQ6A1A2 396 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 SLC2A7Q6PXP3 512 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 NYAP1Q6ZVC0 841 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PARGQ86W56 976 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 GALNT13Q8IUC8 556 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 DNAJC9Q8WXX5 260 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 MED30Q96HR3 178 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 BTN2A3PQ96KV6 586 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 REEP2Q9BRK0 252 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CPEB1Q9BZB8 566 aaKnown RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 TNKS2Q9H2K2 1166 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CAB39LQ9H9S4 337 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 TBCCD1Q9NVR7 557 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 L1RE1Q9UN81 338 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 TRIM38O00635 465 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 AFPP02771 609 aaKnown RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 MAT2AP31153 395 aaKnown RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 RCVRNP35243 200 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 VAV2P52735 878 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PHC1P78364 1004 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 TMPRSS15P98073 1019 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 GUCY2DQ02846 1103 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 CLCA4Q14CN2 919 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 ANO6Q4KMQ2 910 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 SCIMPQ6UWF3 145 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 ZNF366Q8N895 744 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 APOBEC4Q8WW27 367 aaKnown RBP8.1□□□□□ -1.11
LIMS1-203ENST00000393310 RELTQ969Z4 430 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 TUBGCP3Q96CW5 907 aa8.1□□□□□ -1.11
LIMS1-203ENST00000393310 ZDHHC12Q96GR4 267 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms