RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 LRRC8CQ8TDW0 803 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 NAT14Q8WUY8 206 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 KCTD4Q8WVF5 259 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 SCRN2Q96FV2 425 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 ZNF641Q96N77 438 aaPredicted RBP12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 ACOX2Q99424 681 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 IL36AQ9UHA7 158 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 DCDC2Q9UHG0 476 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 HCN2Q9UL51 889 aa12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 MUC22E2RYF6 1773 aaPredicted RBP12.17□□□□□ -0.46
SPTBN1-203ENST00000389980 UBA6A0AVT1 1052 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 ARNTLO00327 626 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 OR1I1O60431 355 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 ECI2O75521 394 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 MPOP05164 745 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 LHCGRP22888 699 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 HADHAP40939 763 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 GLRBP48167 497 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 LIG3P49916 1009 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CLCN5P51795 746 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CCDC85BQ15834 202 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 HECTD2Q5U5R9 776 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 GKAP1Q5VSY0 366 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 TAS2R42Q7RTR8 314 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 SDCCAG8Q86SQ7 713 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CLEC14AQ86T13 490 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 PIM3Q86V86 326 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 LMNTD2Q8IXW0 634 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 PLPP6Q8IY26 295 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CACNA2D3Q8IZS8 1091 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 STK40Q8N2I9 435 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CCDC97Q96F63 343 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CABS1Q96KC9 395 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 C1QTNF1Q9BXJ1 281 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 B4GALT6Q9UBX8 382 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 TLK1Q9UKI8 766 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 GAPDHSO14556 408 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 PLIN3O60664 434 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 KAT7O95251 611 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 NEFHP12036 1026 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 BPIP17213 487 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 OGNP20774 298 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 KCNA4P22459 653 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 SLC12A2P55011 1212 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 POU4F1Q01851 419 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 PTSQ03393 145 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 DLG1Q12959 904 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 TYSND1Q2T9J0 566 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 ITPRIPL2Q3MIP1 535 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 TPRG1Q6ZUI0 275 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 USP45Q70EL2 814 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 LRCH3Q96II8 777 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 VWA7Q9Y334 891 aa12.16□□□□□ -0.46
SPTBN1-203ENST00000389980 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 FSBPO95073 299 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 PROCP04070 461 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 FMO4P31512 558 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 HTR4Q13639 388 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 CES4AQ5XG92 561 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 SERPINA13PQ6UXR4 307 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 ZCCHC23Q6ZST2 131 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 GALNT7Q86SF2 657 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 SUSD6Q92537 303 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 NXNL1Q96CM4 212 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 THOC1Q96FV9 657 aaKnown RBP12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 MCCC1Q96RQ3 725 aaPredicted RBP12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 MANSC1Q9H8J5 431 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 IL26Q9NPH9 171 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 CACNA2D2Q9NY47 1150 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 CPSF2Q9P2I0 782 aaKnown RBP12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 CD207Q9UJ71 328 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 RUVBL2Q9Y230 463 aaKnown RBP12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 ACOT9Q9Y305 439 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 PPIL1Q9Y3C6 166 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 ANKRD12Q6UB98 2062 aa12.15□□□□□ -0.46
SPTBN1-203ENST00000389980 GRXCR2A6NFK2 248 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 H7C0S8 307 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 PLK4O00444 970 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 KPNA3O00505 521 aaPredicted RBP12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 CHUKO15111 745 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 NDUFS3O75489 264 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 PRAMEF1O95521 474 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 TIMP2P16035 220 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 UGT1A6P19224 532 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 UGT1A1P22309 533 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 UGT1A4P22310 534 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 UGT1A3P35503 534 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 UGT1A5P35504 534 aa12.15□□□□□ -0.47
SPTBN1-203ENST00000389980 IL12RB1P42701 662 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms