RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 KAT7O95251 611 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 BCL10O95999 233 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 FASP25445 335 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 WNT4P56705 351 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 RPL24P83731 157 aaKnown RBP-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ARID5AQ03989 594 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 CD300CQ08708 224 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 GALNT2Q10471 571 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 CTBP1Q13363 440 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 GNL2Q13823 731 aaKnown RBP-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 CAMK1Q14012 370 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 PGS1Q32NB8 556 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 IQCCQ4KMZ1 466 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ATAT1Q5SQI0 421 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 GPATCH4Q5T3I0 446 aaKnown RBP-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 THEMIS2Q5TEJ8 643 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 LCN10Q6JVE6 187 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ASB18Q6ZVZ8 466 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ANO5Q75V66 913 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 SHFQ7M4L6 423 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 LRRTM3Q86VH5 581 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ZNF354CQ86Y25 554 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 MKXQ8IYA7 352 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 CCDC105Q8IYK2 499 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 HACE1Q8IYU2 909 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 C1orf87Q8N0U7 546 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 TMEM178AQ8NBL3 297 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 AFAP1L1Q8TED9 768 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 LRRC15Q8TF66 581 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 KRT12Q99456 494 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 PSD2Q9BQI7 771 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 SARS2Q9NP81 518 aaKnown RBP-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 PLSCR3Q9NRY6 295 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 FAM212BQ9NTI7 297 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 NECAP2Q9NVZ3 263 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 C14orf119Q9NWQ9 140 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 RCC2Q9P258 522 aaKnown RBP-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 KLHL42Q9P2K6 505 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ZNF69Q9UC07 566 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 Q9UF83 564 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 KLHL20Q9Y2M5 609 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 STYXL1Q9Y6J8 313 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 LAMB2P55268 1798 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 ICE1Q9Y2F5 2266 aa-0.73□□□□□ -2.53
RNU6-540P-201ENST00000384622 WNK1Q9H4A3 2382 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 EYSQ5T1H1 3165 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 URB1O60287 2271 aaKnown RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 LOC102723971A0A1B0GUV8 181 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 A0A1W2PQ72 361 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CTAGE9A4FU28 777 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 DDTLA6NHG4 134 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 A8MXK9 166 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 TMEM233B4DJY2 109 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 AKR1B15C9JRZ8 316 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 H3BUI4 141 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 PANO1I0J062 215 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 SLC16A6O15403 523 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 AP1G1O43747 822 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CTAGE8P0CG41 777 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 IGHV4-38-2P0DP08 117 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 HARSP12081 509 aaKnown RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 ALADP13716 330 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 MYOD1P15172 320 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CD1EP15812 388 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 S1PR1P21453 382 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CD72P21854 359 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 OAS2P29728 719 aaKnown RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 STX2P32856 288 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 NR2C2P49116 596 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CLCNKBP51801 687 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 PFN3P60673 137 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 ABCE1P61221 599 aaKnown RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 RHAGQ02094 409 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 FCHO2Q0JRZ9 810 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CHAF1AQ13111 956 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 PABPC4Q13310 644 aaKnown RBP eCLIP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 COL28A1Q2UY09 1125 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 NCAPH2Q6IBW4 605 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 TCF24Q7RTU0 167 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 ATG9AQ7Z3C6 839 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 TRABD2AQ86V40 505 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CTAGE4Q8IX94 777 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 RNF175Q8N4F7 328 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 SUN3Q8TAQ9 357 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 DUSP19Q8WTR2 217 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 TBC1D22AQ8WUA7 517 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CHPT1Q8WUD6 406 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 RSC1A1Q92681 617 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 FAM167AQ96KS9 214 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 DNAJC7Q99615 494 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 DDX50Q9BQ39 737 aaKnown RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 DGCR6LQ9BY27 220 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 FRMD8Q9BZ67 464 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CERS4Q9HA82 394 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 PCDH9Q9HC56 1237 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 CHPF2Q9P2E5 772 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 VPS51Q9UID3 782 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 HERC5Q9UII4 1024 aaKnown RBP-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 AMDHD2Q9Y303 409 aa-0.74□□□□□ -2.53
RNU6-540P-201ENST00000384622 OR2W1Q9Y3N9 320 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms