RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 LRRC66Q68CR7 880 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 ALG1LQ6GMV1 187 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 CAVIN1Q6NZI2 390 aaKnown RBP14.7□□□□□ -0.06
HDAC6-204ENST00000376643 SLC30A9Q6PML9 568 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 TECPR1Q7Z6L1 1165 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 GALNT13Q8IUC8 556 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 AGBL5Q8NDL9 886 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 OR4D9Q8NGE8 314 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 EXD1Q8NHP7 514 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 CCL4L1Q8NHW4 92 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 PIH1D2Q8WWB5 315 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 SH3KBP1Q96B97 665 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 SCARF2Q96GP6 870 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-204ENST00000376643 SPATS2LQ9NUQ6 558 aaKnown RBP14.7□□□□□ -0.06
HDAC6-204ENST00000376643 ETNK2Q9NVF9 386 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 UVRAGQ9P2Y5 699 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 LUC7L2Q9Y383 392 aaKnown RBP14.7□□□□□ -0.06
HDAC6-204ENST00000376643 HEMK1Q9Y5R4 338 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-204ENST00000376643 PRAMEF33A0A0G2JMD5 474 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 A0A0J9YYE9 177 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 PMS2P1A4D2B8 440 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 RGSL1A5PLK6 1076 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 MATN3O15232 486 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 FZD6O60353 706 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 PRAMEF10O60809 474 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 ECEL1O95672 775 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 TRBC1P01850 177 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 HGFP14210 728 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 CSTF2P33240 577 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 ADCY8P40145 1251 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 MAZP56270 477 aaKnown RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 UBASH3AP57075 661 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 RAB15P59190 212 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 CTBSQ01459 385 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 PAFAH1B3Q15102 231 aaKnown RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 KIAA1614Q5VZ46 1190 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 KCTD16Q68DU8 428 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 ALKBH5Q6P6C2 394 aaKnown RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 TP53INP2Q8IXH6 220 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 KCTD6Q8NC69 237 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 OR10G6Q8NH81 332 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 ZNF564Q8TBZ8 553 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 CCHCR1Q8TD31 782 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 MAML1Q92585 1016 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 USP7Q93009 1102 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 AHCYL2Q96HN2 611 aaKnown RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 NAP1L5Q96NT1 182 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 TSGA13Q96PP4 275 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 TAAR9Q96RI9 348 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 ASPSCR1Q9BZE9 553 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 SUDS3Q9H7L9 328 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 RMI1Q9H9A7 625 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 KCNK4Q9NYG8 393 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 VPS18Q9P253 973 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 CAPN11Q9UMQ6 739 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 PCDHGA3Q9Y5H0 932 aa14.69□□□□□ -0.06
HDAC6-204ENST00000376643 GCN1Q92616 2671 aaKnown RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 HELZ2Q9BYK8 2649 aaKnown RBP14.69□□□□□ -0.06
HDAC6-204ENST00000376643 EFSO43281 561 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 DUX1O43812 170 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 ITIH1P19827 911 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
HDAC6-204ENST00000376643 FASLGP48023 281 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 PPM1FP49593 454 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-204ENST00000376643 LIMK2P53671 638 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 OR1D5P58170 312 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 FANCCQ00597 558 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 LY6DQ14210 128 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 ZFYVE27Q5T4F4 411 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 HGSNATQ68CP4 663 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 DOK6Q6PKX4 331 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 NRROSQ86YC3 692 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 CTNNBL1Q8WYA6 563 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-204ENST00000376643 TEFMQ96QE5 360 aaKnown RBP14.68□□□□□ -0.06
HDAC6-204ENST00000376643 LYSMD1Q96S90 227 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 SLC38A3Q99624 504 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 DDA1Q9BW61 102 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 TDRD1Q9BXT4 1180 aaKnown RBP14.68□□□□□ -0.06
HDAC6-204ENST00000376643 ADGRE3Q9BY15 652 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 FAM117AQ9C073 453 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 EPB41L1Q9H4G0 881 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 RAD18Q9NS91 495 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 RBM22Q9NW64 420 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDAC6-204ENST00000376643 PKD2L2Q9NZM6 624 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 TTLL3Q9Y4R7 772 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.068e-7■■■□□ 18.4
HDAC6-204ENST00000376643 KALRNO60229 2985 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 AHCTF1Q8WYP5 2266 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 UNC13CQ8NB66 2214 aa14.68□□□□□ -0.06
HDAC6-204ENST00000376643 TTC24A2A3L6 582 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-204ENST00000376643 CAPN5O15484 640 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-204ENST00000376643 B4GAT1O43505 415 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 MFSD11O43934 449 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 H2AFZP0C0S5 128 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 TCF4P15884 667 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 CTPS1P17812 591 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 AK4P27144 223 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-204ENST00000376643 STC1P52823 247 aa14.67□□□□□ -0.06
HDAC6-204ENST00000376643 DPYSL3Q14195 570 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms