RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 LRRK1Q38SD2 2015 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ZFC3H1O60293 1989 aaKnown RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 USP9YO00507 2555 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CLEC18AA5D8T8 446 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 RHPN2P1A8MT19 583 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 TNFRSF10CO14798 259 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 HGSO14964 777 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 ECEL1O95672 775 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 NTRK1P04629 796 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 FGF1P05230 155 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 ELFN1P0C7U0 828 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CR2P20023 1033 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 IL1R2P27930 398 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CD1CP29017 333 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CSF2RBP32927 897 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 TRIM23P36406 574 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CASRP41180 1078 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 NR1D2Q14995 579 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CLEC18BQ6UXF7 455 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 LIPIQ6XZB0 460 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 C17orf82Q86X59 251 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 TMEM139Q8IV31 216 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 UMODL1-AS1Q8N2C9 162 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CLEC18CQ8NCF0 446 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 KIAA1524Q8TCG1 905 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 ZDHHC1Q8WTX9 485 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CTNNBL1Q8WYA6 563 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 BTBD6Q96KE9 485 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 PACSIN1Q9BY11 444 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
CLCN6-205ENST00000376492 GPATCH2LQ9NWQ4 482 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 TAAR2Q9P1P5 351 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
CLCN6-205ENST00000376492 ANKRD36A6QL64 1941 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 EEF2KO00418 725 aaKnown RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 DUX1O43812 170 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 FUCA1P04066 466 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 HOXC4P09017 264 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CCNB1P14635 433 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TCF4P15884 667 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 KELP23276 732 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 AK4P27144 223 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CCR10P46092 362 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TPI1P60174 286 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CCZ1BP86790 482 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CCZ1P86791 482 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 GRM3Q14832 879 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 DPYSL2Q16555 572 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TXLNBQ8N3L3 684 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TSEN2Q8NCE0 465 aaKnown RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 GPBAR1Q8TDU6 330 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TEKT4Q8WW24 435 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CELF6Q96J87 481 aaKnown RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 NSMCE3Q96MG7 304 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TUBGCP5Q96RT8 1024 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-205ENST00000376492 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 TUBD1Q9UJT1 453 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 MAN2B2Q9Y2E5 1009 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 ST14Q9Y5Y6 855 aa13.11□□□□□ -0.31
CLCN6-205ENST00000376492 CFAP69A5D8W1 941 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 NKX2-8O15522 239 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 RAD1O60671 282 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 PROSCO94903 275 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 TUBB4AP04350 444 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 RARAP10276 462 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 PRKAR1AP10644 381 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 THRAP10827 490 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 MYCLP1P12525 358 aaPredicted RBP13.1□□□□□ -0.31
CLCN6-205ENST00000376492 SERPINA4P29622 427 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 GNPDA1P46926 289 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 NDST2P52849 883 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 LIMK2P53671 638 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 SLC25A11Q02978 314 aaKnown RBP13.1□□□□□ -0.31
CLCN6-205ENST00000376492 ACOX1Q15067 660 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 TCEAL1Q15170 157 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 PNCKQ6P2M8 343 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 SLC30A9Q6PML9 568 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 DPPA4Q7L190 304 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 SRLQ86TD4 932 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 HEATR4Q86WZ0 1026 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 C9orf43Q8TAL5 461 aaPredicted RBP13.1□□□□□ -0.31
CLCN6-205ENST00000376492 SLC35G2Q8TBE7 412 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 ECHDC3Q96DC8 303 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 DDA1Q9BW61 102 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms