RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CEPT1Q9Y6K0 416 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CCDC162PA2VCL2 907 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 TMEM233B4DJY2 109 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CASQ2O14958 399 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 DENRO43583 198 aaKnown RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 GLP2RO95838 553 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 HNRNPLP14866 589 aaKnown RBP eCLIP13.97□□□□□ -0.178e-8■■■□□ 16.1
MSH5-202ENST00000375740 ITGAXP20702 1163 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 MSX2P35548 267 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 RGRP47804 291 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 SGSHP51688 502 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 BTG3Q14201 252 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 OGFRL1Q5TC84 451 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 BBS5Q8N3I7 341 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 FNDC8Q8TC99 324 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CNDP1Q96KN2 507 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 BTBD9Q96Q07 612 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 RNF38Q9H0F5 515 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CWH43Q9H720 699 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 MTF2Q9Y483 593 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 CD3EAPO15446 510 aaKnown RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 KDELR3O43731 214 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 TSPAN3O60637 253 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 STC2O76061 302 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CXCL10P02778 98 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 RBP1P09455 135 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 TFPTP0C1Z6 253 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CDH2P19022 906 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 PIK3R1P27986 724 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 OXCT1P55809 520 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 XIAPP98170 497 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 NSUN2Q08J23 767 aaKnown RBP eCLIP13.97□□□□□ -0.17
MSH5-202ENST00000375740 SEMA3AQ14563 771 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 ACAP2Q15057 778 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 C6orf52Q5T4I8 152 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 GPR158Q5T848 1215 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 TMEM198Q66K66 360 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 NXNQ6DKJ4 435 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 PIWIL4Q7Z3Z4 852 aaKnown RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 PIM3Q86V86 326 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 GRIN3AQ8TCU5 1115 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 IGSF21Q96ID5 467 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 DEFB118Q96PH6 123 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 TRIB3Q96RU7 358 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 MGME1Q9BQP7 344 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CINPQ9BW66 212 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 TIMMDC1Q9NPL8 285 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 UBA2Q9UBT2 640 aaPredicted RBP13.97□□□□□ -0.17
MSH5-202ENST00000375740 SEPT3Q9UH03 358 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 CDYLQ9Y232 598 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 AP4B1Q9Y6B7 739 aa13.97□□□□□ -0.17
MSH5-202ENST00000375740 A8MT66 165 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 RPP40O75818 363 aaKnown RBP13.96□□□□□ -0.17
MSH5-202ENST00000375740 NDST3O95803 873 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 SLC4A1P02730 911 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 CORO1AP31146 461 aaKnown RBP13.96□□□□□ -0.17
MSH5-202ENST00000375740 KCNC1P48547 511 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 CCR3P51677 355 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 PLK1P53350 603 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 CDKL1Q00532 357 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 ANKDD1AQ495B1 522 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 SLC44A4Q53GD3 710 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 ALG1LQ6GMV1 187 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 ZNF549Q6P9A3 640 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 RNF168Q8IYW5 571 aaPredicted RBP13.96□□□□□ -0.17
MSH5-202ENST00000375740 ACTRT2Q8TDY3 377 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 OVCA2Q8WZ82 227 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 WBP2Q969T9 261 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 EXOC2Q96KP1 924 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 CEP295NLQ96MC4 621 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 PSKH2Q96QS6 385 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 TRPM5Q9NZQ8 1165 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 AFF4Q9UHB7 1163 aaKnown RBP13.96□□□□□ -0.17
MSH5-202ENST00000375740 ARHGAP26Q9UNA1 814 aa13.96□□□□□ -0.17
MSH5-202ENST00000375740 FOXD2O60548 495 aaPredicted RBP13.96□□□□□ -0.18
MSH5-202ENST00000375740 CLDN11O75508 207 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 IPO13O94829 963 aaKnown RBP13.96□□□□□ -0.18
MSH5-202ENST00000375740 WISP3O95389 354 aaPredicted RBP13.96□□□□□ -0.18
MSH5-202ENST00000375740 IRF1P10914 325 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 ARHGEF6Q15052 776 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 RPS27LQ71UM5 84 aaKnown RBP13.96□□□□□ -0.18
MSH5-202ENST00000375740 ZNF461Q8TAF7 563 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 PLD4Q96BZ4 506 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 PHF21BQ96EK2 531 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 RTKNQ9BST9 563 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 RETREG1Q9H6L5 497 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 PFDN4Q9NQP4 134 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 GTSE1Q9NYZ3 720 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 TRIM17Q9Y577 477 aa13.96□□□□□ -0.18
MSH5-202ENST00000375740 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 RHOCP08134 193 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 THRAP10827 490 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 CD97P48960 835 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 PSMD7P51665 324 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 PRMT2P55345 433 aa13.95□□□□□ -0.18
MSH5-202ENST00000375740 ZNF177Q13360 481 aaPredicted RBP13.95□□□□□ -0.18
MSH5-202ENST00000375740 FAM45BPQ6NSW5 357 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms