RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PAGE2Q7Z2X7 111 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 FAM220AQ7Z4H9 259 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 ADCY4Q8NFM4 1077 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 CLEC4DQ8WXI8 215 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PIGKQ92643 395 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 DEC1Q9P2X7 70 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 LEF1Q9UJU2 399 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 KPNA5O15131 536 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PGM3O95394 542 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 SKP1P63208 163 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 CLPTM1LQ96KA5 538 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 LRRC4CQ9HCJ2 640 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 TOP3BO95985 862 aaKnown RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 MT-ND1P03886 318 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 SSR2P43308 183 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 ENKURQ8TC29 256 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 STK32AQ8WU08 396 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 APOLD1Q96LR9 279 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PPP3R2Q96LZ3 170 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 ZNF132P52740 706 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 RBBP4Q09028 425 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 INO80DQ53TQ3 878 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 GDF6Q6KF10 455 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-203ENST00000375604 LRRC52Q8N7C0 313 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PMM1Q92871 262 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PGM2Q96G03 612 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 DPEP2Q9H4A9 486 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 PTGFRNQ9P2B2 879 aa17.12■□□□□ 0.33
MCF2L-203ENST00000375604 DBTP11182 482 aaKnown RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 CCND3P30281 292 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SLC20A2Q08357 652 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 CCNYL2Q5T2Q4 361 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 C9orf64Q5T6V5 341 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 RNASEH2BQ5TBB1 312 aaKnown RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 TAC4Q86UU9 113 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SETD9Q8NE22 299 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 HMGXB4Q9UGU5 601 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 CPQQ9Y646 472 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 TNFAIP8O95379 198 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 MATN4O95460 622 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 CDC42P60953 191 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SPPL2CQ8IUH8 684 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 DENND6AQ8IWF6 608 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SLC4A11Q8NBS3 891 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 PSMG2Q969U7 264 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 CLN6Q9NWW5 311 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SLC17A6Q9P2U8 582 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 NT5EP21589 574 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 ERVK-21P61565 698 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 ZCCHC7Q8N3Z6 543 aaKnown RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 TFAP2BQ92481 460 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 UBE2E3Q969T4 207 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 RNF31Q96EP0 1072 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 HSPA7P48741 367 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 VARS2Q5ST30 1063 aaKnown RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 KAT2AQ92830 837 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 NOL11Q9H8H0 719 aaKnown RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SAMHD1Q9Y3Z3 626 aaKnown RBP17.11■□□□□ 0.33
MCF2L-203ENST00000375604 HOXC6P09630 235 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 CRHR2Q13324 411 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 ITGADQ13349 1161 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 UBXN2BQ14CS0 331 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 BBS12Q6ZW61 710 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 GPR180Q86V85 440 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 KCT2Q8NC54 265 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 ZFP28Q8NHY6 868 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 TBATAQ96M53 351 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 KIFC1Q9BW19 673 aa17.11■□□□□ 0.33
MCF2L-203ENST00000375604 SLC38A8A6NNN8 435 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 IL6P05231 212 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 GABRB2P47870 512 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 ITCHQ96J02 903 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 A0A1B0GW55 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 RGSL1A5PLK6 1076 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 GOT2P00505 430 aaKnown RBP17.1■□□□□ 0.33
MCF2L-203ENST00000375604 TRBC1P01850 177 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4L2P0CJ85 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4L3P0CJ86 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4L4P0CJ87 422 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4L5P0CJ88 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4L6P0CJ89 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4L7P0CJ90 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 TIE1P35590 1138 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 PACS2Q86VP3 889 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 OR52J3Q8NH60 311 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 DUX4Q9UBX2 424 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 NRP2O60462 931 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 TIPRLO75663 272 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 FGF1P05230 155 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 ARL2P36404 184 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 TIGD2Q4W5G0 525 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 MON1BQ7L1V2 547 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 CADM2Q8N3J6 435 aa17.1■□□□□ 0.33
MCF2L-203ENST00000375604 CYB5D2Q8WUJ1 264 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms