RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RPN2P04844 631 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 FOXN2P32314 431 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 DAB2P98082 770 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 TMED1Q13445 227 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SAMD4BQ5PRF9 694 aaKnown RBP17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 WASHC2DQ5SRD0 308 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 MARCH8Q5T0T0 291 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 OR9Q1Q8NGQ5 310 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 COL26A1Q96A83 441 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 TPD52L3Q96J77 140 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 HERPUD2Q9BSE4 406 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SEZ6LQ9BYH1 1024 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 PCDH12Q9NPG4 1184 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 ZNF180Q9UJW8 692 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 KCNE2Q9Y6J6 123 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 POP4O95707 220 aaKnown RBP17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 PSMD8P48556 350 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 DGKGP49619 791 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 CCT8P50990 548 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC34A1Q06495 639 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 GPM6BQ13491 265 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 MS4A13Q5J8X5 152 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 CLNKQ7Z7G1 428 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 PACS2Q86VP3 889 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 OR6Y1Q8NGX8 325 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 CLHC1Q8NHS4 586 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 HEXDCQ8WVB3 486 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 IMP3Q9NV31 184 aaKnown RBP17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC2A6Q9UGQ3 507 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 MYO18AQ92614 2054 aaKnown RBP17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SRRM3A6NNA2 597 aaPredicted RBP17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 H0Y858 1186 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 MAGEC1O60732 1142 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 FSBPO95073 299 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 GJB5O95377 273 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 ALPIP09923 528 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 FASP25445 335 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SPAM1P38567 509 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 GPX6P59796 221 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 NCALDP61601 193 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 OCA2Q04671 838 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 TIGD2Q4W5G0 525 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 SERPINA9Q86WD7 417 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 IGSF21Q96ID5 467 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 INVSQ9Y283 1065 aa17.93■□□□□ 0.46
PTPDC1-202ENST00000375360 DNM1LO00429 736 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 OTCP00480 354 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 HAPLN1P10915 354 aaPredicted RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 COL6A1P12109 1028 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 FGFR3P22607 806 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 TSNQ15631 228 aaKnown RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 MAPKAPK3Q16644 382 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 STK32CQ86UX6 486 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 RAVER1Q8IY67 606 aaKnown RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 PTCD2Q8WV60 388 aaKnown RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 EXOSC4Q9NPD3 245 aaKnown RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 C6orf203Q9P0P8 240 aaPredicted RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 SNX6Q9UNH7 406 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 C16orf96A6NNT2 1141 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 DNTTP04053 509 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 IRX1P78414 480 aaPredicted RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 RDH11Q8TC12 318 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 AGAP11Q8TF27 550 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 F5P12259 2224 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 MBLAC1A4D2B0 266 aaPredicted RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 KPNA5O15131 536 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 SERPINA6P08185 405 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 GSTM1P09488 218 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 HSPA7P48741 367 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 PSME3P61289 254 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 AP1S1P61966 158 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 CAP1Q01518 475 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 ALDH6A1Q02252 535 aaKnown RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 KIAA0408Q6ZU52 694 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 TDRPQ86YL5 185 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 BANPQ8N9N5 519 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 BHLHE22Q8NFJ8 381 aaPredicted RBP17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 MAGEC3Q8TD91 643 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 KLHL4Q9C0H6 718 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 BLOC1S6Q9UL45 172 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 GRIN2DO15399 1336 aa17.92■□□□□ 0.46
PTPDC1-202ENST00000375360 INPPL1O15357 1258 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 VAV1P15498 845 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 GRIA3P42263 894 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 NRG1Q02297 640 aaPredicted RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 RTP2Q5QGT7 225 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 PATL1Q86TB9 770 aaKnown RBP17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 TP53INP2Q8IXH6 220 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 FBXO30Q8TB52 745 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 ASZ1Q8WWH4 475 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 ATL1Q8WXF7 558 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 TSSK3Q96PN8 268 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 BBS4Q96RK4 519 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 KCTD3Q9Y597 815 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 WNT6Q9Y6F9 365 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 UBXN8O00124 270 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 VPS4BO75351 444 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 SLC35G4P0C7Q5 338 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 PSMC3P17980 439 aa17.91■□□□□ 0.46
PTPDC1-202ENST00000375360 PRKG2Q13237 762 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms