RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 BAIAP2L2Q6UXY1 529 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ACTR3BQ9P1U1 418 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 A0A1W2PQ72 361 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CDKN2BP42772 138 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 GALNT3Q14435 633 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 TIFABQ6ZNK6 161 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PLPPR4Q7Z2D5 763 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SMG8Q8ND04 991 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 GRHL1Q9NZI5 618 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CALML5Q9NZT1 146 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 RBM34P42696 430 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 MED22Q15528 200 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ARMC6Q6NXE6 501 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SMIM5Q71RC9 77 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 HPS6Q86YV9 775 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PLCZ1Q86YW0 608 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PEX13Q92968 403 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF408Q9H9D4 720 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 FBXO5Q9UKT4 447 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PARP4Q9UKK3 1724 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 METTL18O95568 372 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 RPL9P32969 192 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ITGA7Q13683 1181 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ACSBG2Q5FVE4 666 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PERM1Q5SV97 790 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SATL1Q86VE3 508 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 NECTIN3Q9NQS3 549 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 TRMT13Q9NUP7 481 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 B3GNT3Q9Y2A9 372 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CD72P21854 359 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 PEX2P28328 305 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CTSKP43235 329 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 KIR3DL1P43629 444 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 PPM1LQ5SGD2 360 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 KRT77Q7Z794 578 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 SYT15Q9BQS2 421 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 RETREG1Q9H6L5 497 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ILVBLA1L0T0 632 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 TBX10O75333 385 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 NFIXQ14938 502 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 TEX44Q53QW1 395 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 RHBDF1Q96CC6 855 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 SCGB3A2Q96PL1 93 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF510Q9Y2H8 683 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 E5RJQ4 531 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 PDCD5O14737 125 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 APOC1P02654 83 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 SLC15A1P46059 708 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 OR52E6Q96RD3 313 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CIB1Q99828 191 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 EXD2Q9NVH0 621 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 GLYATQ6IB77 296 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 C4orf32Q8N8J7 132 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 PGRP06401 933 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 GNAZP19086 355 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 GSTM3P21266 225 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ADIGQ0VDE8 80 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ZNHIT3Q15649 155 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 KCTD8Q6ZWB6 473 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CLP1Q92989 425 aaKnown RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 GBA3Q9H227 469 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ALG9Q9H6U8 611 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 SFMBT1Q9UHJ3 866 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 FADS2O95864 444 aaKnown RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CHKAP35790 457 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 SLC5A3P53794 718 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CBR4Q8N4T8 237 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 NXNL1Q96CM4 212 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CCDC32Q9BV29 185 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 STX16-NPEPL1H3BU86 382 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 STX16O14662 325 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CASKO14936 926 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 DARSP14868 501 aaKnown RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CCNCP24863 283 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 GLUD2P49448 558 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ADAM17P78536 824 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ARMC12Q5T9G4 340 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 LCLAT1Q6UWP7 414 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 TOP6BLQ8N6T0 577 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 OR5K1Q8NHB7 308 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CCDC107Q8WV48 283 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 RANBP3Q9H6Z4 567 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 YWHAQP27348 245 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 E2F2Q14209 437 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 TRAM1Q15629 374 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ATP13A5Q4VNC0 1218 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 PTCHD4Q6ZW05 846 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 CEP295NLQ96MC4 621 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 SRP68Q9UHB9 627 aaKnown RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF222Q9UK12 451 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 VPS28Q9UK41 221 aa10.17□□□□□ -0.78
PTCH1-204ENST00000375290 NCF1BA6NI72 391 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 NCF1CA8MVU1 366 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 NCF1P14598 390 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-204ENST00000375290 KERAO60938 352 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 GTF2E2P29084 291 aaKnown RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PTGIRP43119 386 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CAPZA1P52907 286 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms