RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SPAG4Q9NPE6 437 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 SPG21Q9NZD8 308 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 ADAMTS6Q9UKP5 1117 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 SARDHQ9UL12 918 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 FIS1Q9Y3D6 152 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 BACE2Q9Y5Z0 518 aa12.21□□□□□ -0.45
UBR4-203ENST00000375225 MRPL42Q9Y6G3 142 aaKnown RBP12.21□□□□□ -0.45
UBR4-203ENST00000375225 ILVBLA1L0T0 632 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 INSIG1O15503 277 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 TBC1D4O60343 1298 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 SOAT2O75908 522 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 RHOBTB1O94844 696 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 RHOCP08134 193 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 LINGO3P0C6S8 592 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 GFAPP14136 432 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 PAX7P23759 505 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 CCR10P46092 362 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 PPP3CCP48454 512 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 THOP1P52888 689 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 PEX6Q13608 980 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 ADGRE1Q14246 886 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 AGKQ53H12 422 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 HECTD3Q5T447 861 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 IRAK1BP1Q5VVH5 260 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 TMEM198Q66K66 360 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 GLT6D1Q7Z4J2 308 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 TMCO2Q7Z6W1 182 aaPredicted RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 ISCA2Q86U28 154 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 SPATA24Q86W54 205 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 PGBD5Q8N414 524 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 FIBCD1Q8N539 461 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 BHLHE22Q8NFJ8 381 aaPredicted RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.462e-7■■■■■ 62.8
UBR4-203ENST00000375225 RMDN1Q96DB5 314 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 DNAJC1Q96KC8 554 aaKnown RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 CYP2S1Q96SQ9 504 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 CCT7Q99832 543 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 NUSAP1Q9BXS6 441 aaKnown RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 DERL2Q9GZP9 239 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 GID8Q9NWU2 228 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 HSFX1Q9UBD0 423 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 CNOT11Q9UKZ1 510 aaKnown RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 NDUFAF1Q9Y375 327 aa12.21□□□□□ -0.46
UBR4-203ENST00000375225 MTF2Q9Y483 593 aaPredicted RBP12.21□□□□□ -0.46
UBR4-203ENST00000375225 ANKRD36A6QL64 1941 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TYW5A2RUC4 315 aaKnown RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 CCDC162PA2VCL2 907 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TCAF2A6NFQ2 919 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 NEMP2A6NFY4 417 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 H0YJX3 145 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 H3BNX3 289 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TXNDC9O14530 226 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 AURKAO14965 403 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 AZIN1O14977 448 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 AHCYL1O43865 530 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 NRP2O60462 931 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 KERAO60938 352 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 VPS26AO75436 327 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 GJB5O95377 273 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 MLYCDO95822 493 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TBX18O95935 607 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 EFEMP2O95967 443 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 URODP06132 367 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 PIM1P11309 404 aaPredicted RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 ZNF37AP17032 561 aaPredicted RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 VCLP18206 1134 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 CD9P21926 228 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 PEX2P28328 305 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 ACVRL1P37023 503 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TTPAP49638 278 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 ARSDP51689 593 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 CDKN2DP55273 166 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TRIM25Q14258 630 aaKnown RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 KIF19Q2TAC6 998 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 ZNF789Q5FWF6 425 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 REP15Q6BDI9 236 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 OR52E8Q6IFG1 317 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 SLC8B1Q6J4K2 584 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 PRSS55Q6UWB4 352 aaPredicted RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TAS1R1Q7RTX1 841 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 DDX53Q86TM3 631 aaKnown RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 HERC6Q8IVU3 1022 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 STK40Q8N2I9 435 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TSPEARQ8WU66 669 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 KIAA1191Q96A73 305 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 CDKN2AIPNLQ96HQ2 116 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 ZNF512Q96ME7 567 aaPredicted RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 HOPXQ9BPY8 73 aaPredicted RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 SPON2Q9BUD6 331 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 UNKQ9C0B0 810 aaKnown RBP12.2□□□□□ -0.46
UBR4-203ENST00000375225 EBF3Q9H4W6 596 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 TRPM5Q9NZQ8 1165 aa12.2□□□□□ -0.46
UBR4-203ENST00000375225 RNF112Q9ULX5 631 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms