RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 PAMP19021 973 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 PSMA3P25788 255 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 CD6P30203 668 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 HADHAP40939 763 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 ARSDP51689 593 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 MAP7D1Q3KQU3 841 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 UBAP2Q5T6F2 1119 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 SEL1L3Q68CR1 1132 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TBC1D3GQ6DHY5 549 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 KIAA0930Q6ICG6 404 aaPredicted RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 NEK5Q6P3R8 708 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 RFLNAQ6ZTI6 216 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TRMT10CQ7L0Y3 403 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 CBARPQ8N350 705 aaPredicted RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
GJB1-202ENST00000374022 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 GSDMBQ8TAX9 411 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TOE1Q96GM8 510 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 COQ10AQ96MF6 247 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 ZFR2Q9UPR6 939 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 A0A1W2PQU0 124 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 FAM86C2PA6NEL3 165 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 SPAG6O75602 509 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TM7SF2O76062 418 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TDGF1P13385 188 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 ETV3P41162 512 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 GPX6P59796 221 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 PPP2CBP62714 309 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 RPS21P63220 83 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 PPP2CAP67775 309 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 PRAMEP78395 509 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 DMWDQ09019 674 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 Q6ZVL8 140 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 HORMAD1Q86X24 394 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 RAVER1Q8IY67 606 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 FRMD1Q8N878 549 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 HDAC10Q969S8 669 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 DTD2Q96FN9 168 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 CDKN2AIPNLQ96HQ2 116 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 SPACA7Q96KW9 195 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 TBATAQ96M53 351 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 VPS37BQ9H9H4 285 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 FKBPLQ9UIM3 349 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
GJB1-202ENST00000374022 FAM169AQ9Y6X4 670 aa12.78□□□□□ -0.36
GJB1-202ENST00000374022 PIKFYVEQ9Y2I7 2098 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 CCDC163A0A0D9SF12 145 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 H7C0S8 307 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 WNT9AO14904 365 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 RECQL5O94762 991 aaPredicted RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 GSTA2P09210 222 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 TSHRP16473 764 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 ARNTP27540 789 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 AVPR2P30518 371 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 SPAM1P38567 509 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 DCDC1P59894 354 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 CREB5Q02930 508 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 SMAD1Q15797 465 aaKnown RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 ZDHHC20Q5W0Z9 365 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 C3orf62Q6ZUJ4 267 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 NRSN1Q8IZ57 195 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 MAML2Q8IZL2 1156 aaPredicted RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 GPATCH11Q8N954 259 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 GPR26Q8NDV2 337 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 UBLCP1Q8WVY7 318 aaPredicted RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 NUS1Q96E22 293 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 CERS2Q96G23 380 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 PLEKHG4BQ96PX9 1271 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 SUDS3Q9H7L9 328 aaPredicted RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 RAD18Q9NS91 495 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 IL1RAPL1Q9NZN1 696 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 NFKBIL1Q9UBC1 381 aaPredicted RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 ATXN2Q99700 1313 aaKnown RBP12.77□□□□□ -0.37
GJB1-202ENST00000374022 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.37
GJB1-202ENST00000374022 TCRBV9S1A1TA0A576 114 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 CCDC162PA2VCL2 907 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 RIPK2O43353 540 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 VAPBO95292 243 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
GJB1-202ENST00000374022 PHBP35232 272 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 FNTBP49356 437 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 CSTF1Q05048 431 aaKnown RBP12.76□□□□□ -0.37
GJB1-202ENST00000374022 USP39Q53GS9 565 aaKnown RBP12.76□□□□□ -0.37
GJB1-202ENST00000374022 ALS2CLQ60I27 953 aa12.76□□□□□ -0.37
GJB1-202ENST00000374022 TRMT10BQ6PF06 316 aaKnown RBP12.76□□□□□ -0.37
GJB1-202ENST00000374022 FAM151BQ6UXP7 276 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms