RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 ZNF184Q99676 751 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 GORASP1Q9BQQ3 440 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 TBCDQ9BTW9 1192 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 EIF2B4Q9UI10 523 aaKnown RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 ANKRD6Q9Y2G4 727 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 CXCL14O95715 111 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 CYP11A1P05108 521 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 ITGAXP20702 1163 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 NFKBIAP25963 317 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 GRIA3P42263 894 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 MAGEA6P43360 314 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 PFKPQ01813 784 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 RNF220Q5VTB9 566 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 KIAA0930Q6ICG6 404 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 GPSM1Q86YR5 675 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 BCL7CQ8WUZ0 217 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 VPS45Q9NRW7 570 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 COPG1Q9Y678 874 aaKnown RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 FAM155AB1AL88 458 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 PER2O15055 1255 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 SYNCRIPO60506 623 aaKnown RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 SNNO75324 88 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 FGF1P05230 155 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 RPLP2P05387 115 aaKnown RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 EFNA1P20827 205 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 KCNC1P48547 511 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 VEGFBP49765 207 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 KRT72Q14CN4 511 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 CPSF6Q16630 551 aaKnown RBP eCLIP13.17□□□□□ -0.3
NCDN-203ENST00000373253 C18orf21Q32NC0 220 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 TIGD2Q4W5G0 525 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 KCTD11Q693B1 232 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 NADSYN1Q6IA69 706 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 DENND5AQ6IQ26 1287 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 TIFABQ6ZNK6 161 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 IMP4Q96G21 291 aaKnown RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 C8orf48Q96LL4 319 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 CCDC106Q9BWC9 280 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 TRIM4Q9C037 500 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 MTG2Q9H4K7 406 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 MYOCOSA0A1B0GUC4 107 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 KLF11O14901 512 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 INPP4BO15327 924 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 RPP40O75818 363 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 PARNO95453 639 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 C1QAP02745 245 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 KLKB1P03952 638 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PCNAP12004 261 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 ETS2P15036 469 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 ME2P23368 584 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 NDST2P52849 883 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 IL2P60568 153 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 DEFB103AP81534 67 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PLOD1Q02809 727 aaPredicted RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 IL10RBQ08334 325 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 NFYCQ13952 458 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PARP15Q460N3 678 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PSAPL1Q6NUJ1 521 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PYCR2Q96C36 320 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 DRC3Q9H069 523 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 A0A087X1B8 175 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 GNGT2O14610 69 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 SLC2A4P14672 509 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 SYN1P17600 705 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 TM4SF4P48230 202 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PSME3P61289 254 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 ZNF487B1APH4 448 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 GSTA4O15217 222 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 HLA-DPA1P20036 260 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 RARS2Q5T160 578 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 OTUD3Q5T2D3 398 aaPredicted RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 RETSATQ6NUM9 610 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 THUMPD3Q9BV44 507 aaKnown RBP13.16□□□□□ -0.3
NCDN-203ENST00000373253 SYTL2Q9HCH5 934 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
NCDN-203ENST00000373253 SCAMP1O15126 338 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 CLDN11O75508 207 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 RFPL2O75678 378 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 CLDN7O95471 211 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 ARNTP27540 789 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 HSPA7P48741 367 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 STX5Q13190 355 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms