RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 PDGFRLQ15198 375 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 CRTC1Q6UUV9 634 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 VITQ6UXI7 678 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 GDPD4Q6W3E5 623 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 CCDC121Q6ZUS5 278 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 CCDC91Q7Z6B0 441 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 TSPAN33Q86UF1 283 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 PAF1Q8N7H5 531 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 MCCC1Q96RQ3 725 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-203ENST00000371319 TRIM55Q9BYV6 548 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 UNKQ9C0B0 810 aaKnown RBP17.48■□□□□ 0.39
SSBP3-203ENST00000371319 CIPCQ9C0C6 399 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 ECT2Q9H8V3 914 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 POPDC3Q9HBV1 291 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 GPAMQ9HCL2 828 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 OXSMQ9NWU1 459 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 XPR1Q9UBH6 696 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 USH1CQ9Y6N9 552 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 WASF2Q9Y6W5 498 aa17.48■□□□□ 0.39
SSBP3-203ENST00000371319 ANKRD65E5RJM6 399 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 DLDP09622 509 aaKnown RBP17.47■□□□□ 0.39
SSBP3-203ENST00000371319 GRK2P25098 689 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 FMO4P31512 558 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 SLC1A6P48664 564 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 ADAM15Q13444 863 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 SPRED3Q2MJR0 410 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 LACTB2Q53H82 288 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-203ENST00000371319 TECRLQ5HYJ1 363 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 NAPRTQ6XQN6 538 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 GRIN3AQ8TCU5 1115 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 NXPE3Q969Y0 559 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 SCRN2Q96FV2 425 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 MYADMQ96S97 322 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 SORT1Q99523 831 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 HEPHQ9BQS7 1158 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 MTG2Q9H4K7 406 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
SSBP3-203ENST00000371319 DCTN4Q9UJW0 460 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 FNDC3AQ9Y2H6 1198 aaKnown RBP17.47■□□□□ 0.39
SSBP3-203ENST00000371319 MED16Q9Y2X0 877 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
SSBP3-203ENST00000371319 DOCK8Q8NF50 2099 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
SSBP3-203ENST00000371319 UBA6A0AVT1 1052 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 PRRT4C9JH25 899 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 TRIM13O60858 407 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 ATP5BP06576 529 aaKnown RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 CCDC166P0CW27 439 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 BPIP17213 487 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 CA5AP35218 305 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 SLC26A3P40879 764 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 RECQLP46063 649 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 TTPAP49638 278 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 KPNA2P52292 529 aaKnown RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 ABCE1P61221 599 aaKnown RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 SEMG2Q02383 582 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 FAM83EQ2M2I3 478 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 SETMARQ53H47 684 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 AARS2Q5JTZ9 985 aaKnown RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 AGAP9Q5VTM2 703 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 GRAMD4Q6IC98 578 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 TPRG1Q6ZUI0 275 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 CRLF3Q8IUI8 442 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 TDHQ8IZJ6 230 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 CBARPQ8N350 705 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 KLHL32Q96NJ5 620 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 BIRC8Q96P09 236 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 MRPL57Q9BQC6 102 aaKnown RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 PLA2G2FQ9BZM2 168 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 S1PR5Q9H228 398 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 MRPL46Q9H2W6 279 aaKnown RBP17.46■□□□□ 0.39
SSBP3-203ENST00000371319 ZFP14Q9HCL3 533 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 CLEC1BQ9P126 229 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 VPS9D1Q9Y2B5 631 aa17.46■□□□□ 0.39
SSBP3-203ENST00000371319 DENND4AQ7Z401 1863 aa17.46■□□□□ 0.38
SSBP3-203ENST00000371319 A0A1W2PQ67 120 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 TSPAN11A1L157 253 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 A8MX80 341 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 TMEM114B3SHH9 223 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 GPR39O43194 453 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 OR1I1O60431 355 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 DLX3O60479 287 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 H2AFYO75367 372 aaKnown RBP17.45■□□□□ 0.38
SSBP3-203ENST00000371319 SRP72O76094 671 aaKnown RBP17.45■□□□□ 0.38
SSBP3-203ENST00000371319 CTSLP07711 333 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 LHCGRP22888 699 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 NNMTP40261 264 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 FCHO2Q0JRZ9 810 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 CTSL3PQ5NE16 218 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 FAM151BQ6UXP7 276 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 USP45Q70EL2 814 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 TAS2R42Q7RTR8 314 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 PHTF2Q8N3S3 785 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 FITM2Q8N6M3 262 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 GATA5Q9BWX5 397 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-203ENST00000371319 BRD9Q9H8M2 597 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 ELOVL2Q9NXB9 296 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 SLC30A1Q9Y6M5 507 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 LEFTY1O75610 366 aa17.45■□□□□ 0.38
SSBP3-203ENST00000371319 RHOBTB1O94844 696 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms