RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 HGSO14964 777 aaPredicted RBP16.09■□□□□ 0.17
VMA21-202ENST00000370361 CBFA2T2O43439 604 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 TPM1P09493 284 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 GOLGA6DP0CG33 693 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 TRA2AQ13595 282 aaKnown RBP eCLIP16.09■□□□□ 0.17
VMA21-202ENST00000370361 MAP9Q49MG5 647 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 ARHGAP40Q5TG30 622 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 LRRC66Q68CR7 880 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 DENND2CQ68D51 928 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 CCDC81Q6ZN84 652 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 B3GNT8Q7Z7M8 397 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 PIM3Q86V86 326 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 EXD1Q8NHP7 514 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 AP2M1Q96CW1 435 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 CCNL2Q96S94 520 aaPredicted RBP16.09■□□□□ 0.17
VMA21-202ENST00000370361 TDRD1Q9BXT4 1180 aaKnown RBP16.09■□□□□ 0.17
VMA21-202ENST00000370361 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
VMA21-202ENST00000370361 RBM22Q9NW64 420 aaKnown RBP eCLIP16.09■□□□□ 0.17
VMA21-202ENST00000370361 GOLGA6AQ9NYA3 693 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 TAAR2Q9P1P5 351 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 SUFUQ9UMX1 484 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 LOXL2Q9Y4K0 774 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 ARHGEF17Q96PE2 2063 aaPredicted RBP16.08■□□□□ 0.16
VMA21-202ENST00000370361 SLC5A2P31639 672 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 CASP14P31944 242 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 ARHGAP25P42331 645 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 GNPDA1P46926 289 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 STC1P52823 247 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 CLN3Q13286 438 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 SQSTM1Q13501 440 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 TCEA2Q15560 299 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 KIF26BQ2KJY2 2108 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 TMEM164Q5U3C3 297 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 SLITRK4Q8IW52 837 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 Q8N9G6 341 aaPredicted RBP16.08■□□□□ 0.16
VMA21-202ENST00000370361 OR8K1Q8NGG5 319 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 OR2M4Q96R27 311 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 DNAJC7Q99615 494 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 ADGRE3Q9BY15 652 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 FOXP3Q9BZS1 431 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 DEF6Q9H4E7 631 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 RMI1Q9H9A7 625 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 CPNE5Q9HCH3 593 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 VPS18Q9P253 973 aa16.08■□□□□ 0.16
VMA21-202ENST00000370361 TTC24A2A3L6 582 aaPredicted RBP16.07■□□□□ 0.16
VMA21-202ENST00000370361 FGF1P05230 155 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 CD48P09326 243 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 TMEM253P0C7T8 217 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 LIPCP11150 499 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 ZFXP17010 805 aaPredicted RBP16.07■□□□□ 0.16
VMA21-202ENST00000370361 ADCY8P40145 1251 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 GPLD1P80108 840 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 B4GALNT1Q00973 533 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 PTSQ03393 145 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 CFHR1Q03591 330 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 MMRN1Q13201 1228 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 SLC14A2Q15849 920 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 TSPAN33Q86UF1 283 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 NRROSQ86YC3 692 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 RHOT2Q8IXI1 618 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 PELI3Q8N2H9 469 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 AVL9Q8NBF6 648 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 CCDC112Q8NEF3 446 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 CCL4L1Q8NHW4 92 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 CCHCR1Q8TD31 782 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 BRD8Q9H0E9 1235 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 ABCG8Q9H221 673 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 PCDH9Q9HC56 1237 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 RAD18Q9NS91 495 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 SPATS2LQ9NUQ6 558 aaKnown RBP16.07■□□□□ 0.16
VMA21-202ENST00000370361 PCDHB11Q9Y5F2 797 aa16.07■□□□□ 0.16
VMA21-202ENST00000370361 SCN8AQ9UQD0 1980 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 GPR89AB7ZAQ6 455 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.06■□□□□ 0.16
VMA21-202ENST00000370361 PDHA1P08559 390 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 GPR89BP0CG08 455 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 SLC2A4P14672 509 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 CTPS1P17812 591 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 FASLGP48023 281 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 CTBSQ01459 385 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 ZFYVE27Q5T4F4 411 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 GALNT13Q8IUC8 556 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 CCDC13Q8IYE1 715 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 OR4D9Q8NGE8 314 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 COX14Q96I36 57 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 SRPK1Q96SB4 655 aaKnown RBP16.06■□□□□ 0.16
VMA21-202ENST00000370361 STN1Q9H668 368 aaKnown RBP16.06■□□□□ 0.16
VMA21-202ENST00000370361 PKD2L2Q9NZM6 624 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 PISDQ9UG56 409 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 TTLL3Q9Y4R7 772 aa16.06■□□□□ 0.16
VMA21-202ENST00000370361 KALRNO60229 2985 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 MGAQ8IWI9 3026 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 AKR1B10O60218 316 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 ECEL1O95672 775 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 SOD1P00441 154 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 GJC1P36383 396 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 ACTR1BP42025 376 aa16.05■□□□□ 0.16
VMA21-202ENST00000370361 ACTR1AP61163 376 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms