RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CYP4F12Q9HCS2 524 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 DKK4Q9UBT3 224 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 EFR3BQ9Y2G0 817 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 ZFC3H1O60293 1989 aaKnown RBP18.88■□□□□ 0.61
CKS1B-203ENST00000368439 APC2O95996 2303 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 CPED1A4D0V7 1026 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 MT-CO3P00414 261 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 NAP1L1P55209 391 aaKnown RBP18.88■□□□□ 0.61
CKS1B-203ENST00000368439 CDK18Q07002 472 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 AADACL2Q6P093 401 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 EFL1Q7Z2Z2 1120 aaKnown RBP18.88■□□□□ 0.61
CKS1B-203ENST00000368439 KIAA1328Q86T90 577 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 PROSER1Q86XN7 944 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 GKN2Q86XP6 184 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 ARL10Q8N8L6 244 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 CCL4L1Q8NHW4 92 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 SCARF2Q96GP6 870 aaPredicted RBP18.88■□□□□ 0.61
CKS1B-203ENST00000368439 RIOK2Q9BVS4 552 aaKnown RBP18.88■□□□□ 0.61
CKS1B-203ENST00000368439 ADGRE3Q9BY15 652 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 CCDC86Q9H6F5 360 aaKnown RBP18.88■□□□□ 0.61
CKS1B-203ENST00000368439 EVA1BQ9NVM1 165 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 CLCA2Q9UQC9 943 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 SLC17A4Q9Y2C5 497 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 CELSR3Q9NYQ7 3312 aa18.88■□□□□ 0.61
CKS1B-203ENST00000368439 LAMA5O15230 3695 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 C1orf232A0A0U1RR37 186 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 SRRM3A6NNA2 597 aaPredicted RBP18.87■□□□□ 0.61
CKS1B-203ENST00000368439 HACD1B0YJ81 288 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 CASC3O15234 703 aaKnown RBP18.87■□□□□ 0.61
CKS1B-203ENST00000368439 MTSS1O43312 755 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 KRT37O76014 449 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 NFKB1P19838 968 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 GPR1P46091 355 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 POLD2P49005 469 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 SPINT3P49223 89 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 RWDD2BP57060 319 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 XRCC4Q13426 336 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 NOMO1Q15155 1222 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 PCSK7Q16549 785 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 OGFOD3Q6PK18 319 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 KDELC1Q6UW63 502 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 KDELC2Q7Z4H8 507 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 NRROSQ86YC3 692 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 ZNF567Q8N184 647 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 KYQ8NBH2 561 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 GPBAR1Q8TDU6 330 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 HTR3CQ8WXA8 447 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 GLMNQ92990 594 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 COX14Q96I36 57 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 OSBPL8Q9BZF1 889 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 C10orf88Q9H8K7 445 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 CNOT6Q9ULM6 557 aaKnown RBP18.87■□□□□ 0.61
CKS1B-203ENST00000368439 PADI4Q9UM07 663 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 GPR34Q9UPC5 381 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 DOLKQ9UPQ8 538 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 ST14Q9Y5Y6 855 aa18.87■□□□□ 0.61
CKS1B-203ENST00000368439 ANKRD11Q6UB99 2663 aaPredicted RBP18.87■□□□□ 0.61
CKS1B-203ENST00000368439 ACACAQ13085 2346 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 MACROD2A1Z1Q3 448 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 GOLGA6CA6NDK9 693 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 GOLGA6BA6NDN3 693 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 GOLGA6DP0CG33 693 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 PYGMP11217 842 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 RPIAP49247 311 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 CYP4F3Q08477 520 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 KIF5AQ12840 1032 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 HENMT1Q5T8I9 393 aaKnown RBP18.86■□□□□ 0.61
CKS1B-203ENST00000368439 LYSMD3Q7Z3D4 306 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 SFTPA2Q8IWL1 248 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 GPR156Q8NFN8 814 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 MAPK15Q8TD08 544 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 SCG3Q8WXD2 468 aaKnown RBP18.86■□□□□ 0.61
CKS1B-203ENST00000368439 FCRL5Q96RD9 977 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 VAT1Q99536 393 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 CARS2Q9HA77 564 aaKnown RBP18.86■□□□□ 0.61
CKS1B-203ENST00000368439 MAGEE1Q9HCI5 957 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 GOLGA6AQ9NYA3 693 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 UBP1Q9NZI7 540 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 MOSPD1Q9UJG1 213 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 SUFUQ9UMX1 484 aa18.86■□□□□ 0.61
CKS1B-203ENST00000368439 LOC285095A0A1B0GVY8 99 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 RGSL1A5PLK6 1076 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 DDX3YO15523 660 aaKnown RBP18.85■□□□□ 0.61
CKS1B-203ENST00000368439 NOBOXO60393 691 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 PMPCBO75439 489 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 NDST3O95803 873 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 PYGLP06737 847 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 IVLP07476 585 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 PIRTP0C851 137 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 RBL1P28749 1068 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 OTUD4Q01804 1114 aaKnown RBP18.85■□□□□ 0.61
CKS1B-203ENST00000368439 RTP5Q14D33 572 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 TMC3Q7Z5M5 1100 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 TAF8Q7Z7C8 310 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 TRIM74Q86UV6 250 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 ACTL9Q8TC94 416 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 NAT6Q93015 286 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 OXNAD1Q96HP4 312 aaPredicted RBP18.85■□□□□ 0.61
CKS1B-203ENST00000368439 HIC2Q96JB3 615 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 NRSN2Q9GZP1 204 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms