RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CUZD1Q86UP6 607 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 C3orf14Q9HBI5 128 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 A0A0J9YYE9 177 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 C2orf71A6NGG8 1288 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 PGRMC2O15173 223 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 LRIG2O94898 1065 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 RLN1P04808 185 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 TSHRP16473 764 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 BCAP31P51572 246 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 C5orf22Q49AR2 442 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 CPTPQ5TA50 214 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 PCDHB9Q9Y5E1 797 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 PRKG2Q13237 762 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 SULT1C3Q6IMI6 304 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 CHSY3Q70JA7 882 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 OR5B17Q8NGF7 314 aa18.35■□□□□ 0.53
SHANK1-202ENST00000359082 TSEN15Q8WW01 171 aaKnown RBP18.35■□□□□ 0.53
SHANK1-202ENST00000359082 TEFMQ96QE5 360 aaKnown RBP18.35■□□□□ 0.53
SHANK1-202ENST00000359082 CNOT6Q9ULM6 557 aaKnown RBP18.35■□□□□ 0.53
SHANK1-202ENST00000359082 LOC110117498-PIK3R3F6TDL0 507 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 MSI1O43347 362 aaKnown RBP18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ZNF132P52740 706 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 CDH13P55290 713 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ZNF730Q6ZMV8 503 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 FAM129CQ86XR2 697 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ACMSDQ8TDX5 336 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 SLC17A7Q9P2U7 560 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 KCNE2Q9Y6J6 123 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 MEGF6O75095 1541 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 TRIM3O75382 744 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-202ENST00000359082 PAGE1O75459 146 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 HKDC1Q2TB90 917 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 DCLRE1AQ6PJP8 1040 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 SPPL2CQ8IUH8 684 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 NOL11Q9H8H0 719 aaKnown RBP18.34■□□□□ 0.53
SHANK1-202ENST00000359082 IRAK3Q9Y616 596 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 NOS1APO75052 506 aaPredicted RBP18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ADH1AP07327 375 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 MPSTP25325 297 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 CDK9P50750 372 aaKnown RBP18.34■□□□□ 0.53
SHANK1-202ENST00000359082 NECTIN3Q9NQS3 549 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 GULP1Q9UBP9 304 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 SSR2P43308 183 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 MADCAM1Q13477 382 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 C9orf64Q5T6V5 341 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ULK3Q6PHR2 472 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ADCY4Q8NFM4 1077 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 H3BNH8 94 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 SLC7A2P52569 658 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 RNF19BQ6ZMZ0 732 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 NANOGNBQ7Z5D8 188 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 METTL3Q86U44 580 aaKnown RBP18.34■□□□□ 0.53
SHANK1-202ENST00000359082 SLCO6A1Q86UG4 719 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 ABCB9Q9NP78 766 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 SEMA3GQ9NS98 782 aa18.34■□□□□ 0.53
SHANK1-202ENST00000359082 AREL1O15033 823 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 UGT2B11O75310 529 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 CXCL14O95715 111 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 NDUFV1P49821 464 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 FSTL1Q12841 308 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 DACT2Q5SW24 774 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 LPCAT4Q643R3 524 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 DUSP16Q9BY84 665 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 KIAA1522Q9P206 1035 aaPredicted RBP18.33■□□□□ 0.53
SHANK1-202ENST00000359082 TCRBV9S1A1TA0A576 114 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 ZNF879B4DU55 563 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 FPGTO14772 594 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 PRKCIP41743 596 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 CCNYL2Q5T2Q4 361 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 RHBDF2Q6PJF5 856 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 OLFML1Q6UWY5 402 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 FAM35AQ86V20 835 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 HPS1Q92902 700 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 NEUROD4Q9HD90 331 aa18.33■□□□□ 0.53
SHANK1-202ENST00000359082 PDP1Q9P0J1 537 aaPredicted RBP18.33■□□□□ 0.53
SHANK1-202ENST00000359082 ARHGEF33A8MVX0 844 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 TFECO14948 347 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CCL16O15467 120 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 DRD4P21917 467 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 GABRR2P28476 465 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 MATKP42679 507 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CTSKP43235 329 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 PSMD8P48556 350 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CYP4F8P98187 520 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 HSF2Q03933 536 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF155Q12901 538 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CEP68Q76N32 757 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 PIWIL4Q7Z3Z4 852 aaKnown RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 RALGPS2Q86X27 583 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 BSNDQ8WZ55 320 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 KCNN2Q9H2S1 579 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CD84Q9UIB8 345 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 WBP11Q9Y2W2 641 aaKnown RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CLUHO75153 1309 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 TRBV23OR9-2A0A075B6M9 112 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 TLR5O60602 858 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 FGBP02675 491 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 NOMO3P69849 1222 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 SF1Q15637 639 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms